Coregonus clupeaformis (lake whitefish): 121531501
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Entry
121531501 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase arih1 isoform X1
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121531501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121531501
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
121531501
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
121531501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
UBA_ARI1
IBR_1
IBR_2
Ariadne
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
121531501
NCBI-ProteinID:
XP_041692675
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MDSDEGYNYEFDEDEECSEDSGAGEPGDYRFEVLTAEQILQHMVECIREVNDVIQNPATI
TRILLSHFNWDKEKLMERYFDGNVDKLFSECHVINPSKTLTTRPMSTRSSAQDLPCQICY
LNHPNSYFTGLECGHKFCMQCWGDYLTTKIMEEGMGQTISCPAHSCDILVDDNSVMLLIT
DSKVKLKYQHLITNSFVQCNRLLKWCPAPDCHHVVKVHYPDAKPVRCKCGRMFCFNCGEN
WHDPVKCKWLRKWMKRCDDDSETSNWIAANTKECPKCHVTIEKNGGCNHMVCRNQNCQAE
FCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDSQERSRAMLQRYLFYCNRYMNHMQSLRF
EHKLYAGVKAKMEEMQQHNMSWIEVQFLKKAVDVLCQCRSTLMFTYVFAFYLKKNNQSII
FENNQADLENCTETLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRMLLHHVHEGYEKD
QWEDIED
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggactcagacgagggctataactatgaattcgacgaagacgaggaatgcagcgaagat
agcggcgcaggggaaccaggggactaccgcttcgaagtgctgactgccgagcagatcctc
cagcatatggtggagtgtatcagggaggtcaacgatgtcatccagaatcctgcaaccatt
accagaatacttcttagtcacttcaactgggacaaagagaagctcatggagaggtatttt
gatggcaacgtggataagctgttttcagagtgccatgtcatcaaccccagtaaaacgttg
acgacgcgaccgatgagcaccagatcctctgctcaggacctgccatgtcagatctgctat
ctaaaccaccctaactcatatttcactggcctggagtgtggacacaagttctgcatgcag
tgctggggagattacctgacgaccaaaatcatggaggaggggatgggacagaccatttcg
tgtcctgcccatagttgtgatattttagtggatgacaactcagtcatgctcctcataacc
gactctaaagtcaagctgaagtaccaacatttaattaccaatagttttgtacagtgtaat
agactgttgaagtggtgtcctgcaccagactgccatcacgttgtcaaagtccactacccc
gacgccaagcctgtcaggtgcaagtgtggtcgaatgttctgtttcaactgtggggagaac
tggcacgatcctgtcaagtgtaagtggctgagaaagtggatgaaaaggtgtgatgatgac
agtgaaacatccaactggatcgcagctaataccaaggagtgtccaaagtgtcatgtgacc
attgagaagaacggcggctgtaaccacatggtctgtcggaaccagaactgtcaagctgag
ttctgttgggtctgtctggggccctgggagccacacggctcggcatggtacaactgcaat
cgctacaatgaagacgatgccaaggcagccagagactctcaggagcgctccagagcgatg
ttgcagaggtacctgttctactgcaaccgctacatgaaccacatgcagtcgctccgcttc
gagcacaagctgtacgccggggtgaaggccaagatggaggagatgcagcagcacaacatg
tcctggatcgaggtgcagttcctgaagaaggccgtggacgtgctgtgtcagtgtcgctcc
acgctcatgttcacatacgtcttcgccttctacctcaagaagaacaaccagtccatcatc
tttgagaacaaccaggcggacctggagaactgtacagagacgttgtctggatacctggag
agggacatttcccaggattccttgcaggatatcaagcagaaagtacaggacaaatacaga
tactgtgagagccggcggaggatgcttctacaccatgtacatgaaggctacgagaaggac
caatgggaggacattgaggattga
DBGET
integrated database retrieval system
