Coregonus clupeaformis (lake whitefish): 121531524
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Entry
121531524 CDS
T08357
Name
(RefSeq) sodium-dependent neutral amino acid transporter B(0)AT2-like
KO
K05048
solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121531524
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121531524
BRITE hierarchy
Motif
Pfam:
SNF
Tmemb_18A
Motif
Other DBs
NCBI-GeneID:
121531524
NCBI-ProteinID:
XP_041692709
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All DBs
Position
11:47653787..47711408
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AA seq
743 aa
AA seq
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MPKNSKAVKRELDDEVTESVKDLLSNEDTCDDSFKKSSLIVGSGGGDGEGKELNLNGDMD
MEDRGSDAEDDAARPAWNSKLQYILAQVGFSVGLGNVWRFPYLCQKNGGGAYLVPYLILL
IVIGIPLFFLELSVGQRIRRGSIGVWNYISPRLGGIGFASCVVCFFVALYYNVIIGWSLF
YFSQSFQQPLPWHECPLVKNKTTMFVVAECEKSSATTYYWYREALNISDSISESGGLNWR
MTICLLAAWSMVCLAMIKGIQSSGKVMYFSSLFPYVVLICFLVRALLLKGSMDGIRHMFT
PKLEIMLEAKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVL
ATLVVFAVLGFKANIMNTKCVALNTKKIIALLGNEVSHDLIPHHINFSATVSAEDYQQMT
EIIRGVTEKDYPHLGLDSCSIEEELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFLML
VNLGLGSMFGTIEGIITPLVDTFKVRKEFLTVGVCLLAFFIGLLFVQRSGNYWVAMFDDY
SATLPLLIVVILENVAVAWVYGTDKFFEDLKDMLGFTPFRFYYYMWKYVTPLLLILLLGS
SVIQLGMTPPSYSAWIEDLASEKSLSYPPWGLAVCISLVVMAIMPVPVVFFLRYFNIIDE
NAGVVSTISYKKGRIIKESARPEEDDDASLIHAKSPGSEAPSPMPGNSIYRKQNGGVPDA
APNGRYGIGYLMADMPDMPESDL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaacagcaaggccgtcaagagagagcttgacgatgaagtcacagagtccgtc
aaagacctgctatccaatgaggacacgtgtgatgattcctttaagaagagctcgctcatc
gtgggtagcggcggaggtgatggggaagggaaggagcttaaccttaacggagacatggac
atggaggacagaggctcggatgcagaagatgacgcagcgaggccagcctggaacagcaag
ctgcagtacatcctggcccaggtgggcttctctgtaggcctgggcaatgtctggaggttc
ccctacctgtgtcagaagaacggagggggggcgtacctggtgccctacctaatcctgctg
atcgtgattggcatccccctgttcttcctggagctgtcagtggggcagcggatccgcaga
ggcagcatcggggtgtggaactacatcagccctcgtctggggggcatcgggtttgccagc
tgtgtggtgtgcttctttgtggccctctactacaatgtgatcattgggtggagtctgttc
tacttctcccagtccttccagcagcctctgccatggcacgagtgtcccctggtcaaaaac
aaaacgactatgtttgtggtggctgagtgtgagaagagttcggccaccacctactactgg
taccgtgaggctttgaatatctctgactccatctctgagagcggaggcctcaactggagg
atgaccatctgtctgctggccgcctggtccatggtctgccttgccatgatcaagggcatc
cagtcctctgggaaggtgatgtacttcagctcgttgttcccctacgtagtgctgatctgc
ttcctggtcagggctctgctcctcaagggatctatggatgggatccgacacatgttcaca
cccaagttggagatcatgctggaggccaaggtgtggcgcgaagcggccacacaggtcttc
ttcgccctaggcctgggttttggaggggtcatagccttctccagctacaacaaacgggat
aacaactgtcacttcgacgcggtgctggtctccttcatcaacttcttcacctctgtgctg
gccaccctggtggtgttcgccgtgctcggcttcaaggccaacatcatgaacaccaagtgt
gtcgcactgaacactaagaagataattgctttgctagggaatgaggtcagccacgacctg
atcccccaccacatcaacttcagcgctactgtgagtgctgaggactaccaacagatgaca
gagatcatcagaggggtgacggagaaggattacccgcatctgggcctggactcctgcagc
attgaggaagagctcaacaaggcagtgcaaggtacaggcctggccttcattgccttcaca
gaggccatgacccactttccggcatctcccttctggtccgtcatgttcttcctgatgctg
gttaacctgggcctgggcagcatgttcggaaccatcgagggcatcatcacacctttggtc
gacaccttcaaagtccgcaaagagttcctcacagtgggtgtctgtctgctagccttcttc
attggcctgctgttcgtccaacgatctgggaactactgggtggccatgtttgatgactac
tccgccacgctgcccctgctcatagtggtcatcctggagaacgtggctgttgcttgggtc
tacgggactgacaagttctttgaggacctgaaggacatgctgggcttcactccgttccgg
ttctactactacatgtggaagtacgtgacccccctgctgctcatcctgctgctgggctcc
agtgtgatccagctgggaatgaccccacccagctacagtgcctggatagaggacctggcc
agtgagaagtcccttagctatcctccgtggggcctggcggtctgcatctccctggtggtg
atggccatcatgcccgtgcccgtggtcttcttcctccgctacttcaacatcatcgacgag
aacgctggcgtggtgtccaccatctcctacaagaagggccgcatcatcaaggagagcgcc
aggcccgaggaggacgacgatgccagcctcatccacgccaagtcgcccggcagtgaagcg
ccctcgcccatgcctggcaacagcatctatcgtaagcagaatggaggggtccccgatgct
gcgcccaatggccgctacggcatcggctacctgatggctgacatgccagacatgcccgag
tcagacttatag
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