Coregonus clupeaformis (lake whitefish): 121531608
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Entry
121531608 CDS
T08357
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121531608
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121531608
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
DUF6173
Motif
Other DBs
NCBI-GeneID:
121531608
NCBI-ProteinID:
XP_041692838
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Position
19:complement(9437395..9490936)
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AA seq
562 aa
AA seq
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MLEHSSELALVQSLYVNSMRCPPSASATGVPVRNEDLGSLSNGSNGSKMNGSMENLETPD
HDSIKMFVGQIPRSWTETELKELFEPYGAVHQINILRDRTATPPQSKGCCFVTFYTRKAA
LEAQNALHNIKTLTGMHHPIQMKPADSEKTNAVEDRKLFIGMVTKKYGENEVRLMFSAFG
QIEECRILRGPDGLSRGCAFITFSTRAQAANAIKTMHHSQTMEGCTSPMVCKFADTQRDK
EQRRLQQQMAQQMQQLNSASTWGNLAGLGGLTPQYLALLQQATATSNQSSFGNQSSFGNQ
SSFGGMQRLGGVNQLQLQNLATLAAAASAAQNSGGSTNALSANGALGNLYNSAAGQTAGS
SAGAAMNTLASLGLTQGLGGGLAGASMGLNNLNALTGGVSGEYALMLGMAAMNGGLGASM
ANGSGASSMDALTQAYSGMQQYTASALPSLYSQSLLQGAAGGSQKEARSQKEGPEGANLF
IYHLPQEFGDQDVLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNG
FQIGMKRLKVQLKRSKNDSKPY
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacactcgtcggagctagccctggtgcagagcttgtacgtcaacagcatgcgc
tgtcctccctctgcctccgccactggtgtccccgtcaggaatgaggatctaggatctctg
agcaacggcagcaacggcagcaagatgaacggttccatggagaacctggaaacgcccgac
catgactccatcaagatgttcgttggccagatcccccgctcctggacagaaaccgagctc
aaggagctgtttgagccctacggtgccgtgcaccagatcaacatcctcagagaccgcacc
gccacacccccccagagcaaaggatgctgttttgtaacgttttataccagaaaagctgcc
ctggaggcccagaatgcattgcacaacataaagaccttaactgggatgcatcatcccatc
cagatgaaacccgccgacagtgagaaaacaaacgcggtggaagacagaaaactctttatc
ggaatggtgaccaagaaatacggcgagaatgaggtccggttgatgttctctgcttttggc
cagatagaggaatgccgaattctccgtggacccgacggtctgagcagaggctgtgcgttt
atcacattttctaccagggctcaggctgcgaatgcaatcaaaaccatgcatcactctcag
actatggagggctgcacttcccccatggtgtgtaagtttgcggacactcagagggacaag
gagcagcggcgcctgcagcagcagatggcccaacagatgcagcagctcaacagcgcctcc
acctggggaaacctggcagggctgggaggcctcacaccacagtacctggctttgctccaa
caggcgacagctaccagtaaccagagtagttttggtaaccagagtagttttggtaaccag
agtagttttggtggcatgcagagactaggaggtgtgaaccagctgcagctgcagaacctg
gccacgttagctgctgccgcctctgcagcccagaactcaggcggctccaccaacgccctg
tcagccaacggagctttaggtaatctctacaactcagcagcaggccagacagcaggttcc
agcgcaggtgcagccatgaacaccctggcctctctgggcctgacccagggcctcggcggg
ggcctggcgggggcctccatgggtctcaacaatctcaacgccctcactgggggggtcagc
ggtgagtacgccctgatgttaggtatggctgctatgaatgggggtctgggggcctcgatg
gccaacggctctggggcgagctccatggatgccctgacccaggcctactcagggatgcag
cagtacactgcctccgccctgccttccctctacagccagtccttactgcagggagcagcc
ggcgggagccagaaggaggccaggagccagaaggagggtcctgagggggctaacctgttc
atatatcacctgccccaggagtttggagaccaggatgtccttcagatgttcatgcctttt
ggaaacgtcgtctctgccaaagtcttcattgacaaacagaccaatctgagcaagtgcttc
gggttcgtcagctacgacaatccggtgtctgcgcaggccgccatccaggccatgaacggc
ttccagatcggcatgaagaggctcaaggtgcagctgaagcgctccaagaacgacagcaaa
ccctactga
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