Coregonus clupeaformis (lake whitefish): 121531623
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Entry
121531623 CDS
T08357
Name
(RefSeq) shaker-related potassium channel tsha2
KO
K04879
potassium voltage-gated channel Shaker-related subfamily A member 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121531623
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121531623
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121531623
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
121531623
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Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
121531623
NCBI-ProteinID:
XP_041692874
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Position
19:9849564..9853026
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AA seq
483 aa
AA seq
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MTVVSRENLDETVVVSPLYQDDCDVERGDQECSERVVINISGLRFETQLKTLSRFPTTLL
GDPRKRMRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVTMDIFMEEMKFYEIE
DEAIEMFKEDEGMIIEVERPMPDNEFQRQMWLLFEYPESSGPARMIAVVSVSVILISIVI
FCLETLPQFREDTSAGLPFSNHLTTNGTTVHRKPNPFTDPFFMVETLCIVWFSFEFLMRF
LSCPCKPAFFKNAMNSIDILAIAPYFITLGLELAELQGAGSEQAMSLAILRVIRLVRVFR
IFKLSRHSKGLQILGQTLHASISELGLLIFFLLIGVILFSSAVYFAEADDPESGFSSIPA
AFWWAVVSMTTVGYGDMCPVTIGGKIVGSMCAIAGVLTIALPVPVIVSNFNYFYHRERND
EETAVYTHVTCGQQNASFGEFKSTSDSKQSLTKSEYMEEDSCETIRLTNFNPFEQYTGKL
TDV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgtgtcccgtgagaacctggacgagactgtggtagtttctcccctgtaccaa
gatgattgcgacgtggagcgaggcgatcaggagtgcagcgagagggttgtcatcaacatc
tccgggctgcgcttcgaaacacaactgaagaccctctcgcgctttcccaccacgctcttg
ggagacccgcgtaaaaggatgcgctttttcgatccgttgagaaatgagtacttttttgac
aggaatagacccagctttgatgctatcctttattattaccagtctggaggaaggcttagg
agacctgtcaacgttaccatggacattttcatggaagaaatgaaattttatgaaattgaa
gatgaggccatagagatgttcaaagaagatgaaggtatgatcatagaggtggaacgtccg
atgcctgacaacgagtttcagcgccagatgtggttgttatttgagtacccggagagctca
gggcctgcccggatgatcgctgtcgtatcagtcagtgtgattttgatatccattgtgata
ttctgtctagagactttgccacagttcagggaagataccagcgcaggcctaccattcagt
aatcacctcaccacgaatgggactactgtccatagaaaacccaatccattcacagatccg
tttttcatggtggagacactttgcatcgtgtggttttcctttgagtttctcatgaggttt
ttatcgtgcccgtgcaaaccggcttttttcaaaaacgcaatgaactccatcgatatctta
gcgattgcaccttatttcataacccttggccttgaactcgcagagctacagggagcagga
agcgagcaggccatgtcgttagccatactcagagtcatccgtttggttcgagtcttcagg
atttttaaactttccaggcactccaaggggctccaaattctgggccagacactccacgcc
agcatcagcgaactcgggcttttgatattctttcttctcataggggttattctgttttcc
agcgctgtttattttgcagaggcagacgaccctgaatcgggattctcaagtatccccgcc
gctttctggtgggcagtggtgtccatgactacggttggatatggagacatgtgcccggtt
acaattggtggcaaaatagtgggatctatgtgtgccatcgcaggagtgctgaccattgcc
ctacctgtccctgtcatcgtgtccaattttaactatttctatcacagagagcgtaatgac
gaggaaaccgccgtgtatacccacgtgacttgtggtcaacagaacgcttcatttggagaa
ttcaaatcgaccagcgacagcaaacagtccctcaccaaatcagagtacatggaagaggat
tcttgcgagactatcagattaacaaacttcaacccatttgaacagtacactggcaagctg
acggatgtatga
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