Coregonus clupeaformis (lake whitefish): 121531653
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Entry
121531653 CDS
T08357
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121531653
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121531653
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121531653
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Gene cluster
GFIT
Motif
Pfam:
SNF
PIRT
Motif
Other DBs
NCBI-GeneID:
121531653
NCBI-ProteinID:
XP_041692942
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Position
19:complement(12139357..12149719)
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AA seq
779 aa
AA seq
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MDCSEEMNNRQVSDPSTQDSLPQSDNGAVVVTINKQENVPDLPSSNWQPPSKTKEQTFSQ
PVDMPNTRNGTFKTDAPATHNNDVDFAPKEDTVGAECASEDHFTIPSHGTASCPNQSATR
SPVEQNGTGTEISPTTVILGTDGNNSVLPGTVTGDGDDDDEGGDENKARGNWSNKMDFIL
SMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSV
WKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCKNEWNTQDCKD
KDMLLLDSCILRDGNTNSIRNTTFCLSADVIGNLSKLTNITSEINKTYVSPSEEYFKYNV
LNISKGIEYPGDIRWPLALCLLLAWVIVYASLAKGIKSSGKVVYFTATFPYVVLVILLVR
GVTLPGAGDGILYFITPKWEKLYDAKVWKDAATQIFFSLSAAWGGLITLSSYNKFHNNCY
RDTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIEQVADEGPGIAFVVYPEALTRLPL
SPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPRYLRKYKALFTLGCCTSFYILGYP
MITENGMYMLQLVDTYAASYSLIIIAIFELVGVSYIYGLKRFCEDIEMMIGFQPNMFWRV
CWAFVTPTILTFILGLSLYHWKVMTYETYTYPTWSMVMGWLMVVCSVIWIPIMFGIKMHL
APGTFIQRLKLVCSPQPDWGPFLMKHRGERYKNMIDPLGTNSLGLKLPPKHLQLGQTQC
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggattgttctgaagagatgaacaaccggcaggtatctgatccttccactcaggattcg
ttaccacaatcagataatggagcggtcgtagttacaataaacaaacaagagaatgtccca
gatctaccctcttcaaactggcagcctccctcaaaaaccaaggaacaaactttttctcaa
ccggtggatatgcctaacacaaggaatgggacgtttaaaaccgacgcacctgcaacgcat
aataacgacgttgattttgcacccaaggaggatactgttggagcggaatgtgcctctgag
gatcattttacgataccctctcatggcacagcttcctgtcccaatcaaagtgctacaagg
agcccagtagagcaaaatggcacggggacggagattagtcccaccactgtgatactgggg
acagatggaaacaattcggttctacctggcacagtgaccggggacggggatgatgatgat
gaaggaggagatgagaataaagcgaggggaaactggtccaataaaatggacttcattctc
tcaatggttggatatgctgttggtctgggaaatgtttggagattcccatacctagccttc
caaaatggaggaggtgctttcttgattccttatttaatcatgttgggccttgctggaatc
cccatattcttattggaggtgtccttgggtcagtttgcaagccaagggcccgtgtcagta
tggaaagcaatccctgctcttcaaggttgcgggattgccatgttgataatatcagtcttg
attgccatatactataacattataatgtgctggacactgtactacctgttcgcttcgttg
aagggctcactcccctgggcgaactgtaagaatgaatggaacactcaagattgtaaggac
aaagacatgcttcttcttgattcatgcattctgcgggatgggaataccaactctataagg
aatactacattctgtttgtctgccgatgtcattgggaatctgagcaaactcactaacatc
acatctgagatcaacaaaacctatgtcagcccaagtgaagagtattttaagtataatgtc
ctgaacatctccaaagggatagaatacccaggggacatccgctggcctctggccctctgt
ctcctcttagcctgggttattgtctacgcctcactggctaaaggaatcaaatcatctggg
aaggtggtgtatttcacggctaccttcccctacgtggtgctggtgattctgctggtcaga
ggagtgactctgcctggggctggggatggcatcctctacttcatcactcccaagtgggag
aaactctatgatgccaaggtgtggaaggatgctgcaacccagatcttcttctccctgtca
gcagcctggggtggacttatcacgctgtcctcctacaacaagttccataacaactgctac
agggacaccatcattgtgacctgcaccaacagtgccaccagcatcttcgcagggtttgtc
atcttctctgtcatcgggtttatggctcatgagctgaaagtgcccatcgaacaggtggct
gatgagggtcctggcatagccttcgtagtgtatccagaggccctcaccagacttccgctc
tctcccttctgggccatcatcttcttcctcatgctactcacactgggactggataccatg
tttgccactattgagaccatagtgacgtctgtgtcagatgagttccccagatatctgagg
aagtacaaggccctcttcaccctggggtgctgcacctctttctacatcctggggtacccc
atgatcacagagaatggaatgtatatgcttcagctggtggacacatacgcagcctcgtat
tctctgatcatcatcgccatctttgaactggtgggagtttcatacatttatggtctgaag
aggttctgtgaagacattgaaatgatgatcgggttccagccaaacatgttctggagggtc
tgctgggcctttgtgacccccaccattctcacatttatcctgggtctgagtctgtaccac
tggaaggtgatgacctatgagacctacacctaccccacctggtccatggtgatgggctgg
ctcatggtggtgtgttctgttatctggatccccatcatgtttggcatcaagatgcacctg
gcccccggcaccttcatccagcgtctgaagctagtgtgctcccctcagccggactggggt
cccttcctgatgaagcacagaggagaacgctacaagaacatgatcgacccgctaggaacc
aactccctggggctcaaactccctcctaaacacctccaactgggccagacccagtgctaa
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