KEGG   Coregonus clupeaformis (lake whitefish): 121531706
Entry
121531706         CDS       T08357                                 
Name
(RefSeq) AFG3-like protein 1
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cclu01002]
    121531706
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:cclu03110]
    121531706
Peptidases and inhibitors [BR:cclu01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   121531706
Chaperones and folding catalysts [BR:cclu03110]
 Other chaperones and cochaperones
  AAA proteases
   121531706
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_22 AAA_5 AAA_16 TIP49 RuvB_N AAA_2 AAA_14 nSTAND3 AAA_17 AAA_28
Other DBs
NCBI-GeneID: 121531706
NCBI-ProteinID: XP_041693026
LinkDB
Position
19:complement(3505441..3521730)
AA seq 766 aa
MAQMLGLLSTAAFPLQIAVRACVRSSVVAARNVSVLPVFRGSSVRILAQNKLLSSHGYYS
SNGRLYSTEPPKDGKGKESDGSGGRGGGGKRGAGKDWWSRMQKGDIPWDEKEFRALAVLV
AGISSATLYYQFRDTGKEITWKDFVHRYLGRGMVDRLEVVNKQYVRVILVPGAEADASYV
WFNIGSVDTFERNLEAAHHELGVESSHRAAVVYSSESDGTLLMSVIPTLLLIGFLLFTLR
RGPMGGGAGGGRGGPFSMSESTAKMMKDNINTKFKDVAGCEEAKLEIMEFVNFLKNPQQY
LDLGAKIPKGAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMF
AMARKNAPCILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFNTSTNVVVLAGT
NRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPIKLDPAMDKDGLARKMAAAT
PGFTGADIANVCNEAALIAARHLNPHVEGKHFEQAIDRVIGGLEKKTQVLQPNEKKTVAY
HEAGHAIVGWFLQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTREQLFDRMCMMLGGRV
AEQVFFGKITTGAQDDLKKVTQSAYAQIVQFGMSEKVGQVSFDLPRQGEMVMEKPYSEAT
AELIDQEVRDLVDSAYQRTMELIMDKRECVDMVGKRLLEKEVLNKADMLELLGPRPFEEK
STYEEFVEGTGSFEEDTSLPEGLKDWNQEKGDASEELSPVKEKLAQ
NT seq 2301 nt   +upstreamnt  +downstreamnt
atggctcaaatgttggggcttctctcgacggctgcttttcctttacagattgcagtaaga
gcttgtgtacgcagttcagtggtggcagcaaggaatgtatctgtgctgcccgtcttccgt
ggctcttctgtcaggattcttgctcaaaataaattattgtcatctcatggatattattca
tctaatggacgactatactccactgagccgccaaaagatggtaaagggaaggaatcagat
ggcagtggaggccgtggaggtggcgggaaaagaggagcaggaaaagattggtggagccgc
atgcagaagggagacatcccatgggatgagaaggagttccgcgccctggcagtgttggta
gctgggatatcctctgccacactctactatcagttcagggacacaggcaaggagatcacc
tggaaggactttgtccatcgctaccttggcagaggaatggttgaccgtttagaggttgtc
aacaaacagtatgtgagagtcattctagtaccgggagcagaggctgatgcgagctatgtg
tggtttaacatcggtagtgtggacaccttcgagaggaacttggaggcggctcaccatgag
ctgggcgtggagtcctctcatagggcagctgtcgtgtacagctcagaaagtgacgggaca
ttattgatgagcgtgatccccaccctgctgttgattggtttcctgctcttcaccctgcga
cggggaccaatgggaggaggtgctgggggtggaagaggcggtccattcagcatgagtgaa
tcaacagcgaagatgatgaaagacaacatcaacaccaagttcaaggacgtggccggctgt
gaggaggccaagctggagatcatggagtttgttaacttcctgaagaacccccagcagtac
ctggacttgggggccaagattccaaagggtgctgtgctctctggacctccaggcacaggc
aagaccctgctggccaaagccacagcaggagaagccaacgtccccttcatcacagtcaac
ggctctgagttcctggagatgtttgtgggtgttgggcctgccagggtgagagacatgttt
gccatggcccggaagaatgctccctgtatcctgttcatagatgagatagacgcggtgggc
cgcaagaggggcgggggaaactttgggggccagagtgagcaggagaacactctcaaccag
ctgctagtggagatggatgggttcaataccagcactaacgtggttgtcctggcgggtacc
aacagaccggacatcttggatcctgcactcatgaggcctggcagatttgacaggcagatt
tacataggcccacctgacatcaaaggcagggcgtccatcttcaaagtgcacttacggccc
attaaactggaccctgctatggacaaagacggattggccaggaagatggctgccgccaca
ccaggcttcactggagccgacatagctaatgtgtgcaacgaggctgccctaatcgctgct
agacacctcaacccacatgtggaaggaaaacactttgagcaggccattgacagggtcatc
ggaggtcttgagaagaagacccaggtgctgcagcccaatgagaagaagactgtagcgtac
catgaggctgggcatgcaatagtgggctggttcctgcaacatgctgacccactgctgaag
gtgtccatcatccccagagggaaggggttaggctacgcccagtaccttcccaaggagcag
tacctgtacacgcgggaacagctgtttgacaggatgtgtatgatgctgggagggcgtgtg
gctgaacaggtcttctttgggaagatcaccacaggagctcaggacgacctgaagaaggtc
acccagtcagcctacgcacagatagtgcagttcgggatgagtgagaaggtgggccaggtg
tcgtttgacctgcctcggcagggggagatggtgatggagaagccttacagcgaagccacg
gcagagctcatagaccaggaggtcagagacctggtggacagcgcctaccagaggaccatg
gagctcattatggacaagagggagtgtgtggacatggtggggaagcgtctcctagagaag
gaggtcctgaacaaggcggacatgctagagctgctggggccgcggccgtttgaggagaag
tcgacatatgaggagtttgtggaggggacgggcagttttgaagaggacaccagcctgcca
gagggcctgaaggattggaaccaggagaaaggggacgcatctgaggagctgtccccagtt
aaggagaaactggcccaatag

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