Coregonus clupeaformis (lake whitefish): 121531709
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Entry
121531709 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121531709
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121531709
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121531709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
WDR55
Beta-prop_EML_2
EIF3I
zf-RING_5
zf-rbx1
zf-C3HC4_2
Beta-prop_WDR3_1st
WD40
zf-RING_11
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
zf-RING_Vps41
zf-ANAPC11
Rtf2
WD40_2
zf-C3HC4_4
WD40_WDHD1_1st
Beta-prop_EML
CFAP43_N
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
Beta-prop_EIPR1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
121531709
NCBI-ProteinID:
XP_041693029
LinkDB
All DBs
Position
19:complement(3643734..3658284)
Genome browser
AA seq
718 aa
AA seq
DB search
MEVMEVDLQLGGPSREPEPDDVADQVHLPIVIPDSGSETEVEDEADAAPRDPPRLPNTWA
FSQNRVRVEGQVGPRIRMEGHIGRRVTTAATQRQRRARPGVRVHYSTQTAARASSFLDFL
LRVPAANQAEGDSGSTTEVSESEDEAEAPGLAADPPNPAVPSSPRPNPPVTVTPPQGLYS
SDSNATTEAARTETGNQVNPEGVSAPLASSAPALRSSQGDEAEGEGETCSICFEPWTTSG
EHRLATLRCGHLFGYTCIDRWVKGQGHGAKCPQCNKKAKRSDIVLLYARKLRALDNTEQE
SMKRSLEQEHSLRRKAELESAQCRLQLQVMTDECGKLLKQLQELKTLMAQPGCGPSQSSG
ASLSGHSRRQDSTQGGHYVFSKAVLVSQAGGCRVLSYCEPLSCLLASQPSPHTPLVPGCG
VKKVSTMNLKACQYIPIHVKQIRGLAFNRQADSLLLSAALDNTIKLTSLMTNTVVQTYNT
GKPVWSCCWCLDNNNYVYAGLSNGSVLVYDTRDTSTHVQELQPLRSRCPVASLSYVPRTA
SSSFPCGGLISGSLEGGCFWEQVDGTTYRPHMLPLETGCCTDIQVQPESRHCLVTYRPGR
SKPSLRCVLMELNRTPQQDAAQEPSYSCNPVQTFSAGSSCKLLTKNAVFRSPAGEGSTLV
CAGDEATNSTMVWDAGSGSLIQKLSADLPVLDICPFEVNQGSYLASLTEKMLKIYKWE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgatggaggtggacttgcagctggggggccccagtagggaaccagagccagat
gatgtggcagaccaggtacatctccctatcgtcatccctgactctggcagtgaaacagag
gtagaggatgaggcagacgcagctccccgtgacccaccacggctcccgaacacctgggcg
ttcagtcagaacagagtcagagtggagggtcaagttggacccaggatcagaatggagggt
catattgggcgcagggtcaccacagcagccacccagaggcagcggagagccaggccaggc
gtcagggtgcactactccacccagaccgctgctcgtgctagcagcttcctggatttcctg
ctgcgagtccctgcagccaaccaagccgagggcgactctgggagtacgacggaggtgagc
gagtcagaggatgaggcagaggccccagggctagcagcagaccctcccaaccctgccgtt
ccctccagccctcgtccaaaccctccagttacagtcacgccaccccaaggcctttattct
tcagattctaatgcaaccacagaggctgcgagaacagagactggaaatcaagttaatcct
gagggcgtatcagccccactagcctccagtgctccggcccttcgatcatcccagggggat
gaggcagagggggaaggggagacctgctccatctgctttgagccctggaccacgtcaggg
gagcatcgcctggccaccctgcgctgcggacatctctttggctacacctgcatcgaccgc
tgggtgaagggccaaggccatggagccaagtgtccccagtgcaacaagaaggccaagcgc
tccgatatcgtcctcctgtacgcgcgcaagctgagggctctggacaacaccgagcaggag
agtatgaagaggtcactggagcaagagcattcactgcgtaggaaggctgaactggagtca
gcgcagtgccggctacaactgcaggtgatgaccgacgaatgtgggaaactgctcaagcag
ctacaggagctgaagacgctgatggcccagcctggctgtgggccctctcagagctcaggg
gcctctctctctgggcactctcggagacaagacagcacccaggggggccactacgtcttc
tccaaggccgtgctggtgtcccaggcggggggctgcagggtgctatcctactgtgaaccc
ctcagctgcctgctggcctctcagccctccccacatacccccctggtgcccggctgcggg
gtgaagaaggtgagcacgatgaatctgaaggcctgccagtacattcctatccatgtcaaa
cagatcagaggcctggccttcaacagacaggccgacagcctcctgctctctgctgccctg
gacaacaccatcaaactcaccagtctaatgaccaacacggtggtgcagacctacaacaca
ggtaaaccagtgtggagctgctgctggtgcctggacaataacaactatgtgtacgctggt
ctcagtaacggctctgtgctggtgtatgacaccagggacaccagcacgcacgtccaggag
ctacagccgttacgttccaggtgtcccgtggcatccctgtcctatgtgcctcgcaccgct
tccagctcgttcccatgtggtggcctcatctcaggctctctggaggggggctgcttctgg
gagcaagtagacgggaccacctatagaccccacatgttgcccctggagacgggatgctgc
acagacatccaggtgcagccagagagcagacactgtttggtcacctacagaccagggcgc
tccaaaccatcgctgcgctgtgttctgatggagctgaacaggaccccccagcaggacgcg
gctcaggagccctcgtattcctgcaacccagtccagacattcagcgccggctcctcctgc
aagctgctcaccaagaatgccgtgttcagaagcccggccggggagggctccactctggtg
tgtgccggggacgaggccaccaactccaccatggtgtgggatgctgggagtggatccctg
attcagaagttgtctgctgacctccctgtgttggacatctgcccttttgaggtgaaccag
ggcagttacttggcctctctcactgagaagatgctcaaaatctacaagtgggaatga
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integrated database retrieval system
