Coregonus clupeaformis (lake whitefish): 121531780
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Entry
121531780 CDS
T08357
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121531780 (usb1)
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
121531780 (usb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HVSL
HEAT_Maestro_2
DUF7545
Motif
Other DBs
NCBI-GeneID:
121531780
NCBI-ProteinID:
XP_041693157
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Position
19:25203856..25209664
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AA seq
285 aa
AA seq
DB search
MLVSYSSSSEEETEHLQLGGDVTKRKQSWHKDDNSLRKKHKSEEHKASVSVHREDDDSKS
RLPVPGSVLDMFTEEDEDPPTEDSMQHGGRIRSFKHERGNWATYVFFPYIPEDGFLELLD
EMTEVAASHSFSLTRTDEFHLSLSKTVVLRHHWIQPFIQSLRTGLAHGRRFICLAEKLKV
YSNDEKTRTFLAVEVSTGQAQLLELMKAVDSTMEEFNLDTFYKNPSFHISLAWCVGDCTE
HFRKECLQELQGLVDSHEDGPFLLRLDCQELRCKSGNKTFSIPLH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgttagtcagctatagtagcagctctgaagaggagacagaacatttacaattagggggg
gatgtaacaaaaaggaagcaaagttggcacaaagatgacaactcgttgaggaagaagcac
aaatcagaagagcacaaagcgagtgtgtctgtgcatagggaggatgacgactccaagtcc
agactgcctgttcctggcagtgtgctggacatgttcacagaggaagatgaggacccacca
actgaagacagcatgcaacatggtggacggattcgttccttcaaacacgagagaggaaac
tgggccacttacgtgttctttccatacatcccagaggatgggttcttggagctgcttgat
gagatgactgaagtagcagcttcccatagcttctccctcactcgtacagatgagtttcac
ctcagtttatctaagacagtggttctgaggcatcactggatccagcctttcatacagtcc
ctcagaacaggcttggcacatggcaggaggttcatttgtttggctgagaagctgaaggtc
tactctaatgatgagaaaaccaggacgttcctggctgtggaagtctccacaggacaggct
cagctactagagcttatgaaagcagtggacagcactatggaggagttcaaccttgacact
ttttacaagaatccttccttccatataagtctggcctggtgtgttggtgactgcactgaa
cactttcgcaaagagtgtctgcaggagttgcagggtctggttgactcccatgaggatgga
cccttcctcttgagactggactgtcaagagctgcgatgtaagtctgggaacaagaccttt
tccattccactacactga
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