Coregonus clupeaformis (lake whitefish): 121531806
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Entry
121531806 CDS
T08357
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121531806
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Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
121531806
NCBI-ProteinID:
XP_041693211
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Position
19:complement(24431267..24440442)
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AA seq
586 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAGELTSETFTLTAEAEISGHRNNLDCNNSADLRNGM
SNGNDPWLASGISNRGQTSNQEQHPNHGELGRSGSPASGGINRGHYEGFSPGSSKYNRDN
GTNSDLGSPGSSYGSPGSSFSSRHGETYINLESSASEAVRKVRVVKQESGGLGVSIKGGR
ENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDLAVQALKKAGKEVTLEV
KYIREVSPLFKKPSLVADLPWDGVRPQSPNFSGSEDSGSPKHSGAKDRKVIPLKMCFISR
NLTIPDLENRLLELHSPDGQHTVVLRCKDSPSAHSWFTAIHTNIAALLPQTLAHINSYLG
SSTTGSHPQLKHISWLAEQVQLDGGRHQFRPIVMALTEKDILLFESVPWNREAWSTPLLT
HPLLATRLVHSGSARSSPAQGADLVFATRTGTGRGIVSHVFRVETHWDLSSWTRALVQGG
HSAAELIKEISIGCMLNRQDVRLTLHYEKGFTVTREPGEPAVGTVLFRYPFEKLKMSTDD
GIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLSRLGLLT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctggacacgagcggacaaaaatggtcaattagaccttttgctccgggaccgc
tggattcgggtagcgggcgaattgaccagcgagactttcacattaacggcggaagcagag
ataagcgggcacaggaacaacttggattgcaacaattcagcggacctacgaaatggaatg
tcaaacggaaacgacccatggttagcgtctggaatttcgaaccgtggtcaaacctcgaac
caagaacaacatccgaaccatggtgagctaggacgaagcggtagcccagcgagcgggggc
atcaacaggggtcactacgaaggttttagccctggctctagcaagtataatcgtgataac
ggtacgaactcagatttgggcagcccagggtccagttacggtagtcctggatctagcttc
agttccaggcatggcgaaacgtacatcaatttagaatccagcgcatcggaagctgtgcgt
aaagttcgagttgtaaaacaagagtcgggcgggttgggggtcagcatcaaggggggtcgg
gaaaaccgaatgcccatcctcatatccaagatcttccccggacttgcagctgatcagagt
cgagctcttcgggtcggcgacgcgatcctctcagtcaatggaaacgacctaagggaggcc
acgcatgatctagcggtgcaggctctaaaaaaggctgggaaagaggttacgcttgaggtg
aaatatatcagggaggtttccccactgtttaagaagccgtccttggtggcagacctacca
tgggatggggtgcgtcctcaatcccccaacttcagtggcagtgaggactcggggtccccc
aaacacagcggggccaaggaccggaaggtcatccccctcaaaatgtgcttcatcagcagg
aacctgactatacctgacctggagaacagactcttggagctgcactctcctgatggccag
cacacggtggtgttgcgctgtaaggacagccccagcgcccactcctggttcacagccatc
cacaccaacattgctgccctgctgcctcagaccttggcccacatcaactcctacctgggc
tccagcaccacggggtcccacccccaactcaaacacatcagctggctggcagaacaggtc
cagttggatggtgggcggcaccagttccgaccaatcgtcatggcattgacagagaaagat
atcctgctgtttgaatcagtgccatggaaccgcgaagcctggtccacacccctgctcaca
cacccactactcgccacaagactggtgcactctggcagtgcccgcagttccccggcgcag
ggggcagacctggtgtttgccactcggacgggtacagggcggggcatcgtatcccatgtg
ttccgggtggagacgcactgggacctgtcctcatggacccgggcgctggtgcaggggggg
cattctgctgcagaactgattaaggagatctccattggttgcatgctgaacaggcaggac
gttcgcctcactcttcattatgagaagggcttcactgtgacccgggagccaggggagcct
gcagtgggcactgtgctcttcagataccccttcgagaagctcaagatgtccacagacgac
gggatccgcaacctctacctggactttggaggtccagagggtgaaatggtgtttgacctg
cactctggccccaagcccgtggtgtttgttcttcattccttcctgtcggccaaactgtct
cgtctgggcctgctgacgtga
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