Coregonus clupeaformis (lake whitefish): 121531842
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Entry
121531842 CDS
T08357
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04115
p53 signaling pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04137
Mitophagy - animal
cclu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121531842 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121531842 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121531842 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
121531842 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121531842 (siah1)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121531842 (siah1)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121531842 (siah1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
121531842
NCBI-ProteinID:
XP_041693266
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All DBs
Position
19:complement(27927497..27947655)
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AA seq
335 aa
AA seq
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MSGRANVQPMNSWKGVLKLFTCIAARTTANKPKELPTFQEKKKALFGNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgttcagcccatgaactcatggaagggggtgctcaagctcttc
acgtgcatagctgctagaacaaccgccaacaaacctaaagagttacccacatttcaagag
aagaagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgtgccccctcccagcgtgtccccaccctgtctggc
actacggcctctaacagcgacctggccagcctgtttgagtgccccgtctgcttcgactat
gtgttgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccggccc
aagctcacctgctgccccacctgccggggcccgctgggctccatccggaacctggccatg
gagaaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggctgcgaggtg
acgctgccccacacagacaaggcggagcacgaggagctgtgtgagttccggccgtactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggatgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacgctgcagggcgaggacatagtgttcctagcc
acggacattaacctgcctggggcagtggactgggtcatgatgcaatcctgcttcggcttc
cactttatgctggtcctggagaagcaggagaagtacgacggccaccagcagttctttgcc
atcgtgcagctgatcggcacgcggaagcaggcagaaaactttgcctaccgcctggagctc
aacgggcatcggcgacggctcacctgggaggccacgccccgctccatccacgagggcatc
gccacggccattatgaacagcgactgcctagtgtttgacacctccatcgcgcagctgttc
gctgagaacggtaacctgggcatcaacgtcaccatatccatgtgctga
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