Coregonus clupeaformis (lake whitefish): 121531849
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Entry
121531849 CDS
T08357
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121531849 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121531849 (exosc6)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121531849 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
121531849
NCBI-ProteinID:
XP_041693281
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Position
19:complement(23353061..23354860)
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AA seq
277 aa
AA seq
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MPTDTKRVRGPEVSQSPSLFLCKTAVKKSTASNDARVDGRQRGQVDVRSVFVRCGLISQA
KGSAYIEAGNTKLICCVYGPRETERKDETDMKSGRLITDMRFAPFSCRERGSWIQGSDEK
DLSLMLLESLRPGVCLHKYPRSQIEVNVMVLENDGSVLAHAVTCASMALADAGIEMYDLV
LGCAVRQEGATYLIDPTILEENGFNLASGSRENLGSLTVAFLPSLNQISGLQSDGEMGVD
TLTGGVRTCIEGCFKLYPVIQQALSKAVRRKAPPSES
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgacacaaaaagggtacgtggcccagaagtgtctcaaagtccatctctcttt
ctgtgtaaaaccgcggtaaagaagtccaccgcttcgaacgacgccagggtagatggcagg
cagcgtggtcaagtggatgtccgttcagtttttgtccgatgtgggctgatcagtcaagcc
aaaggttcagcttacattgaagctgggaacacgaagctcatctgctgtgtttatggtccc
agagagactgagcgtaaggatgagacggatatgaaatccggaagactgattactgacatg
agatttgccccattctcttgtcgagagagaggctcgtggattcaaggtagtgatgaaaag
gatctgtcactgatgctgttggagagcctgaggccaggagtgtgcttgcacaagtatcct
cgctctcagattgaagtcaatgtgatggtccttgaaaacgacggctccgtcctggcacat
gcagtcacctgtgcgtccatggcactggcggacgcaggtatagagatgtacgatctggtt
cttggatgcgcagtccgtcaggaaggtgccacatacctcatcgaccctaccattctagag
gaaaatggtttcaacttggcctcaggatccagggagaatttgggaagcctgacagttgca
tttctgccaagtctgaaccagatttctggactacaatcggatggcgagatgggcgtggac
accctgactgggggtgtgcgcacatgcattgaggggtgtttcaaactgtaccctgtcatt
cagcaagcactgtccaaggccgtgcgaagaaaagcaccaccatcagagagctga
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