Coregonus clupeaformis (lake whitefish): 121531857
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Entry
121531857 CDS
T08357
Symbol
phaf1
Name
(RefSeq) UPF0183 protein C16orf70 homolog isoform X1
KO
K27411
phagosome assembly factor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121531857 (phaf1)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
Others
121531857 (phaf1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
121531857
NCBI-ProteinID:
XP_041693304
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All DBs
Position
19:23129955..23139960
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AA seq
425 aa
AA seq
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MLDLEVVPERSLGNEQWEFALGMPLAQAISILQKHCRIIKNVQVLYSEQMPLSHDLILNL
TQDGIKLLFDACNQRLKVIEVYDLSKVKLKYCGVHFNTQAIAPTIEQIDQSFGATHPGVY
NAAEQLFHLNFRGLSFSFQLDSWNEAPKYEPNFAHGLASLQIPHGATVKRMYIYTGNNLQ
DTKAPVMPLACFLGNVYAECVDVLRDGVGPLGLRLRLLTAGCGPGVMADAKVRAVERNIY
FGDSCQDVLSALGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDLLFDSS
THLVKKFVLHTNFPGHYNFNIYHRCDFKIPLVIKKEGADVHGEDCTLTTYSKWDQIQELL
GHPMEKPVVLHRSSSANNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGAPRPSSRARA
EASGH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctggaagttgttccggaaagatctttaggaaatgaacaatgggaattcgca
ttagggatgccattggcccaggccatttccattttacagaaacactgccgcatcatcaag
aatgtccaggttctttacagtgaacaaatgccactcagtcatgacctcatactcaacttg
actcaggatggaattaaactgctgtttgacgcctgtaaccagagactgaaggtgattgaa
gtatacgacttgagcaaagttaaattgaaatactgtggagtacatttcaacactcaggct
atagcacccaccatagagcagattgaccagtcctttggcgccacacaccctggagtatac
aatgctgcagagcaactgttccacctgaactttcgaggactctccttctccttccagctt
gactcatggaatgaagctcccaagtatgagcctaattttgcccatggcttggcctccctg
cagattccgcacggggccacagtgaaacggatgtacatctacactgggaacaacctacag
gacaccaaggccccagtgatgccccttgcctgtttccttggcaatgtttatgcagagtgt
gtggatgtgctgagggatggggtggggccacttggtctgagacttcgcctcctcactgca
ggatgtgggcccggggtgatggctgatgccaaggtgcgtgccgtggagaggaacatttac
tttggagactcctgtcaggatgtgctgagcgctctgggctcgccacacaaagtattctac
aagtccgaagacaagatgaagatccactctccgtcgcctcacaagcaggtcccgtccaaa
tgcaatgactacttcttcaactacttcactctgggggtggacttactctttgattctagc
acacacctggtgaagaagtttgtccttcatactaacttccccggccattacaatttcaac
atatatcatcgatgcgatttcaagattccacttgtcatcaagaaagaaggtgctgacgtt
catggggaggactgcaccctcactacctacagcaagtgggatcagattcaggagctgctt
ggacaccccatggagaagcctgtcgtgctccataggtcatcctcggcaaataacaccaat
ccctttggctctacattctgttttggactacagcgaatgatctttgaggtgatgcagaac
aaccacatagcttcagtgaccctgtacggcgcccccagacccagcagccgggccagagcc
gaggccagcggccactga
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