Coregonus clupeaformis (lake whitefish): 121531872
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Entry
121531872 CDS
T08357
Name
(RefSeq) partitioning defective 6 homolog alpha-like
KO
K06093
partitioning defective protein 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121531872
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121531872
09144 Cellular community - eukaryotes
04530 Tight junction
121531872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121531872
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121531872
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
L51_S25_CI-B8
Motif
Other DBs
NCBI-GeneID:
121531872
NCBI-ProteinID:
XP_041693330
LinkDB
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Position
19
Genome browser
AA seq
406 aa
AA seq
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MVLSAGVQRANMSRYQRTPLKNTDNVVEVKSKFEAEYRRFALKKRGTGGFQEFYRLLQTV
HHIPGVEVLLGYADIQGDLLPINNDDNFYKALSSANPLLRIIIQKRDVDQPVVFATNSLQ
RRKKGLAGLRPAQQKTKPGLMIGLPQDFRQISSIIDVDILPETHRRVRLHKHGTNKPLGF
YIRDGVSMRVTPQGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVNGIDVAGKSLDQV
TDMMVANSHNLIVTVKPANQRNNVVPRASKVSAGGNSSSGSVGSAFSHDSAPSPASQSVS
HHSNSNSMAEGDSDEDGDLIIESDSLPHYLPHRCVSNGNGSHRESPLSSSLGQRPLPQSM
SLPSSSSLSDSKASLSSLTTPTHNGSPTKTSSSQESMREDGNIITL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggtcctatccgctggcgttcaacgcgctaacatgtcaaggtaccagaggacccctttg
aaaaacaccgacaatgtggtcgaggtcaagagcaaatttgaggcggagtacagacgtttc
gctttgaagaagaggggcaccggtggctttcaggagttttaccggctgctgcagaccgtt
caccacatccccggtgtggaagtgctgctgggatacgctgacatccagggtgacctgctg
ccaatcaacaatgatgacaacttctacaaagccctctcctcagccaatccactgctcagg
atcatcatccagaagagagatgtggatcagcctgtggtctttgccaccaactccctgcag
aggaggaaaaagggtctggcagggttgcgcccggcgcagcagaagaccaaaccaggcctg
atgattggccttccccaggacttccgccagatctcctccatcatcgatgtcgacatcctg
cccgagacacaccggcgtgtccgcctgcataagcacggtaccaacaagcccctgggtttc
tatattcgggatggggtgagcatgcgggtcacgcctcagggtgtggagaaggtgcctggt
gtcttcatctcgcggctggtgcgtggaggcctggctgagagcacaggcctgctgggggtc
aacgatgagatcctggaggtcaacggcattgacgtggccggtaagtctttggaccaggtg
acagacatgatggtggccaacagccacaacctgatcgtgacggtgaagccggccaaccag
cgcaacaacgtggtgccccgggcaagcaaggtctcggcaggggggaacagctcctctgga
tccgtaggctccgccttctcccatgactcagcccccagccctgcctctcagagtgtcagt
caccatagcaacagtaacagcatggcggagggcgacagcgacgaggacggagaccttatc
attgagagtgacagcctgccacattacctgccccatcgctgtgtgtccaacggtaacggc
agccacagagagtctccattgtcctcgtcactggggcaacggcccctccctcagagcatg
tccctgcccagcagcagctctctgtcagacagcaaggcctccctgagctccctgaccacc
cctacacacaacggcagccccaccaagaccagcagcagccaggagagcatgagagaggat
gggaacatcatcacactgtaa
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