KEGG   Coregonus clupeaformis (lake whitefish): 121531934
Entry
121531934         CDS       T08357                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121531934
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cclu01009]
    121531934
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cclu03021]
    121531934
Protein phosphatases and associated proteins [BR:cclu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121531934
Transcription machinery [BR:cclu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     121531934
    Little elongation complex (LEC)
     121531934
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing CMS1
Other DBs
NCBI-GeneID: 121531934
NCBI-ProteinID: XP_041693437
LinkDB
Position
19:42520660..42561537
AA seq 602 aa
MAALRQERRYGLSCAKINKNVPNKSLYHVKLTDTAIRTLEAYQNLKGSLPNQPAISFKGS
QGYIKIPAPSPDASDALRVFSFYLSSDSKDKPQASFDCIHQYVSREGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGSTRGKCVKIQRKQGLSSNMDSSSNR
HSPSSKRSGAPSPVALRPLRDRIIHVLALKAYRKPELLLWLERERASPKDKADLGAVLDE
VAKLNPKDHSFTLKDEFYSHVQKDWPGYLEEEKQLIHRLLARKLQPLSFSSQLKSFQSNH
SFHKTPGDSPSQLSPVKTPSVKRPLPSDLFDFQTPKKQRLDHSLPLQSPSNGHLGPIGAR
SSSGPGNTSVQTKTEFERTNNHVQGSPNGLYTRHKLDGSSSIPKLERTEPVPAVPSPKAP
QTEPSICTDQQLADGQHKKKKSKKHKDKEREHLKQDWIENSPDLKQNQEHLNDHEGAKTP
VTRTSPEELSDYLIKYNTITASEQRQQYKEDFCAEYDEYRALHHRIGTITEMFVQLGSKI
NTLSPGTQEYKLMEDQILQKYRKYKKKFPGYREDKKRCEYLHQKLSHIKGLILDYDCTQG
PS
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcgtcggtatgggctctcctgtgcaaaaatcaacaaaaac
gttccaaataaatctctatatcacgtcaagctaactgataccgccattcgaacgcttgaa
gcatatcagaatcttaagggatccttaccaaatcagccagcaatttccttcaaggggagc
caggggtacatcaagatccccgccccgtccccagatgcctcggacgcactaagggtattt
tccttctacctgtccagtgatagcaaggacaaacctcaggccagcttcgactgcatacac
cagtatgtctcaagggagggcagggagcacctggagggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcgtaccagatgactcgggagcgcatgtctcaggtg
gagaaggacatcatgagcaggtcggccatcgagatcaagccaggctccacacgtggtaaa
tgtgtgaagatccagaggaagcagggcctgtcgtcaaacatggacagcagcagcaacagg
cactcccccagcagcaagaggagcggggcccccagcccagtggccctcaggcccctaaga
gaccgcatcatccacgtccttgccttgaaggcctacaggaagcctgagcttctgctgtgg
ctggagagggagagggccagtcctaaggacaaggctgacctgggagcagtactggacgag
gttgctaaactgaatcccaaagaccacagctttactctgaaggatgagttctacagtcac
gtccagaaggattggcccggttacctagaggaagagaagcagctcatccataggctcctg
gccaggaaactgcagccactgagcttcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctggggattctccgtcacaactcagcccagtcaagactccctct
gtgaaacgccccttgccctccgacctatttgattttcagacccccaagaagcaaagacta
gatcacagtttacccctgcagtcgccttccaatggacaccttggtcccattggagcccgt
agctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaaccaac
aatcatgtccagggaagccctaatggtctctacacacggcacaaactggatggttcctcc
agtattcccaagctggagaggacagagccggtcccagcagtaccaagccccaaggcccca
caaactgagccctccatctgcactgaccagcagctagctgacggccagcacaaaaagaag
aagtccaagaagcacaaagacaaggaacgggaacacttaaaacaagactggatagagaac
agtcccgacctgaagcagaaccaggaacatctcaatgaccatgagggggctaaaacacct
gtcactcgtacgtcaccggaggagctgtccgactatttaataaagtacaacaccatcaca
gcctcagagcaacggcaacagtacaaggaggatttctgtgcggagtatgatgagtacagg
gccctgcaccaccggatcggtactatcacagagatgtttgttcagctgggctcaaagatc
aacactctgtcccccggtacacaggaatacaagctcatggaggaccaaatactgcagaaa
tacagaaaatataagaaaaagttccctggttaccgggaagacaagaagcgatgcgagtat
ctgcatcagaaactgtctcacatcaaaggtctaatcctggactatgactgtacccagggc
ccttcatag

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