Coregonus clupeaformis (lake whitefish): 121531975
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Entry
121531975 CDS
T08357
Name
(RefSeq) cadherin-related family member 5-like isoform X1
KO
K16505
cadherin-related family member 5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121531975
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Cadherin related
121531975
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
121531975
NCBI-ProteinID:
XP_041693530
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Position
19:44999719..45034557
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AA seq
799 aa
AA seq
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MLGAGTGTWCLVEAVVMQLQGSCLWRWRVLLWSTLLLLSPLRATEDGVSLEDGSGDPGLD
QTVRGENWNPCLEGQDVFSTVKENSMTGELIAELNTELTANDVVWSLTGEDADWFFLERR
SIRLNAPLDRVLDREMQGPVLMAALTCYEEDAVQSEYRIMVEILNENDNTPDFVESTIQP
HSISELAEVNTVVFTVQATDADDDTIMYSIDQTSPDAAYFRVDLPNSGEVILAKPLDYET
KTQLKITIYASEMNTVEKFNTSAILTVNILDGDDQYPQFLPCTPLSSDQSNRVCTNPVYT
VNITEGEQDVLLDFSPGPINAVDGDRGLSSPLSYSILSGADNGRFVMDELTGEVRLMKGV
ENRLQTPTLRLRVMAYQRNDPRKYSVATVVVRVVAVNRFPPQFGRAEYRGFVTEGNSPAS
LVNTYGNIVLLLQIQDRDFSDGINPKMHYSLRSLSNHTQFYHITQEGLLIARTNQLRPSQ
KHRLKVVAVDLESGDMATALIKVEVLYEGQIVPQGPLGNGRLHGSCAVGKAMGVVILGLT
LLGCALYALQHVLRTYRGLKDPEDRGCIAQGKHPNVRLQWFQLVSHSSSMPVLDEVKLKK
EGLSTSTKLLGSQSIYTPADSDPSPLNALPIATPSTTYIQPRLPSSTPTDPNHGPASHNS
THTPATTITPELLKTSTQLLGYSSSSTTPHPSPTPTHDQIDSPLPTHPSPIAEAIGIPTQ
VEETPKDTPPSTSLTQQQVHTPLPPPTPINSPPHPTPPPLPHLPHLSLAHLLQTRYTILS
VQDILTHLYLLHPVQSRTG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgctaggggctgggactggaacctggtgtctggttgaggctgtagtgatgcagctgcag
gggtcttgtctgtggaggtggagggtcctgctctggtccacactactcctcctcagtcca
ctcagagccacagaagatggcgtgtctttggaggatgggagtggcgaccctggcttagac
caaactgtgagaggagaaaattggaacccatgtctggagggccaggatgtgttttccacg
gtcaaagagaacagcatgacaggagaactcatcgctgagctcaacacagagctgacagcc
aatgatgttgtctggagcctcactggggaggacgctgattggttcttcctagaaaggcgg
agcatcagactcaatgccccattggacagagttctggaccgggagatgcagggcccagtc
cttatggcagcgttgacctgctatgaggaggacgctgtgcagagtgagtacaggatcatg
gtggagattctgaatgagaatgataacactcctgattttgtggagagcaccatacagcct
cacagcatcagtgagctggcggaggtgaatacagtggtgtttacagtccaggccacagat
gcagatgacgacaccataatgtactccatcgaccagacctcgcctgatgctgcctacttc
agagtggatctccctaacagtggagaggtgatactggccaagcctctggactacgagacc
aaaacacaactgaagatcaccatatatgcttcggagatgaacactgtggagaagttcaac
accagtgccatcctgaccgtgaatatcttggatggagatgaccagtacccacaattcctg
ccgtgcacgcccctctctagcgaccaatcgaatcgtgtctgcaccaaccccgtctacacg
gttaacatcacagaaggcgaacaggacgttcttctggacttctctcccgggccgatcaat
gctgtggatggagacagaggcctcagctcacctctcagctatagcatcctgtcaggggct
gataatgggcgtttcgtgatggatgagctgacaggggaggtgcgtctgatgaaaggagta
gagaacagactacagacaccgacactacgcctacgggtcatggcgtaccagaggaatgac
cctaggaagtactcagttgccacggtggtggtccgtgttgtggctgtcaaccgctttcct
ccccagtttggtcgggccgaataccgtggctttgtcaccgaaggcaacagccctgcctca
ctggtcaacacatacggaaacattgtgctgctgctacagatacaggacagggacttctct
gatgggatcaatcccaagatgcactactccctgaggtccttgtccaatcacacacagttc
taccacatcacacaggaggggcttctgatcgccaggaccaatcagctacggccatcacag
aaacaccgtctgaaggtagtggctgtggatctggagtcaggtgacatggccacggctctc
ataaaggtggaggtgctgtatgaaggacaaatagtccctcagggcccattggggaatggg
cgtctccatggtagctgtgcagtaggcaaggctatgggtgtggtcatcctggggctgact
ctgttaggctgtgctctgtatgcactgcagcatgtcctccggacatacagaggactgaag
gacccagaggacaggggctgtatagcccaggggaaacaccccaatgtgagattacaatgg
ttccaactggtgagtcacagtagctccatgccggtcctggatgaggtgaagttaaaaaag
gagggtctgagcacctccacaaagctactgggcagtcagagcatctacacccctgcagac
tctgacccttctccactcaacgctttacccatagctacaccctcaacgacctacatccag
cctagactacccagctccactcctacagaccctaatcatggccctgcttcacacaactcc
acccatacacctgctacaaccatcacacctgaactactcaagacatccactcaactcctg
ggctattccagctctagcaccaccccacacccctcacctacacctacccatgatcagata
gactcacctttacctacgcacccctcccctattgcagaagcaataggtatacccactcag
gtagaagagacacctaaagacacacccccttctacctcacttacccaacagcaggtacac
acacctttacctcctcccactccgatcaactcaccccctcaccccacaccccccccccta
cctcacctaccacacctctccctcgctcacctactccagacccgatacacaatcctgagt
gtacaggatatactcacacacctttacttactccaccctgtccagagcaggacagggtag
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