Coregonus clupeaformis (lake whitefish): 121531977
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Entry
121531977 CDS
T08357
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00071
Fatty acid degradation
cclu01212
Fatty acid metabolism
cclu03320
PPAR signaling pathway
cclu04148
Efferocytosis
cclu04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
121531977 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121531977 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121531977 (cpt1b)
03320 PPAR signaling pathway
121531977 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121531977 (cpt1b)
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
121531977 (cpt1b)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121531977 (cpt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PANTS-like
Motif
Other DBs
NCBI-GeneID:
121531977
NCBI-ProteinID:
XP_041693535
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Position
19:complement(45282464..45295488)
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AA seq
771 aa
AA seq
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MAEAHQAVGFQFTVTPDGIDLHLSREVLKHIYLSGVTSWRKRAIRFKNGILTGVYPASPS
SWLIAVIAIMSTMYARIDPSLGMIDTIKRTLPVSGYMTVQTQTVLSAILFATGLWLSLIL
MLRYILKALLSYHTWIFESHGKMSFCTKLWLSLVKMFSGRRPLLYSFQASLPRLPVPSVD
DTITRYLESVRPLLDDEQYNQMEVVANDFKKDQAPKLQKYLILKSWWATNYVSDWWEEYI
YLRGRSPIMVNSNFYTMDLLYVIPTHRQAARAGNVVHAMLQYRRKLERGEHAPLRALGVV
PMCSYQMERMFNTTRIPGIETDFVQHLSDRKHLVVYHKGRFFKVWLYYGGRHLWPSELET
QFQRILNDTTEPQPGELKLAALTAGNRVPWARARLKYFSQGVNKASLEAIETSAFFLTLD
DEAHGYDPDKLRSLDLYAKSLLHGKCYDRWFDKSFTLIAYKNGKLGVNAEHAWADAPIVG
HMWEYVLATDCFHLGYTEEGHCKGDISKGLPPPAKLQWDIPLECQEVIEDSYMVAKEIAD
DVDFHCCLFDEFGKGLIKNSRTSPDAFIQLALQLAQFRDKGEFCLTYEASMTRMFREGRT
ETVRSCTIESTAFVRAMEDKNTKSAQRLDLFRKAADKHQNMYRLAMTGSGIDRHLFCLYI
MSKYLSIDSPFLKQVLSEPWRLSTSQTPQQQLNMVDINKFPRYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSSPETDSYRFGQNIRQAMLDIRALFDQKDKKEM
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcacatcaggcggttggcttccagttcaccgtcaccccagacggcatcgac
ctccacctgagccgtgaggtactcaaacacatctacctgtcgggagtgacgtcatggaga
aagcgtgccataagatttaagaatgggatattgacaggggtctaccctgccagtccatcc
agttggctgatcgcggtgatagccatcatgagcaccatgtatgccaggatagacccatca
ctgggaatgatagacaccatcaagaggaccctgcctgtcagtggctacatgacagtgcag
acccagacagtgctgagtgccatcctgtttgccacggggctgtggctctccctcatcctc
atgctgaggtacattctcaaggcccttctctcctaccacacctggatctttgagtcccac
ggcaaaatgagcttctgcaccaaactctggctgagtctggtgaagatgttctctgggcgc
agacctctcctctacagcttccaggcctccctacccagactacctgtgcctagcgtggac
gacaccataaccaggtacctggaatcagtgcgccccctgctagatgatgagcagtacaac
cagatggaggtggtggccaatgacttcaagaaggaccaggcacccaaactccagaaatac
ctcattctcaaatcctggtgggctactaactacgtgagtgattggtgggaggagtacatc
tacctgagaggcaggagtcccatcatggtcaacagtaacttctacaccatggatctgctg
tacgtgattcccacacacagacaggcagctcgagcagggaatgtggttcacgcgatgctg
cagtaccgacgcaaactagagagaggagaacatgcaccgttgagggctctgggggtggtg
cccatgtgttcctatcagatggagaggatgttcaacaccacacgtatccctggcatagag
acagactttgttcagcacctgagtgaccggaagcacctggtggtgtaccataaggggcgc
ttctttaaggtgtggctgtactacgggggacgtcacctctggccatcggagctggagact
cagttccagaggatcctcaacgacaccacagagccacagcctggggaactcaaactggct
gccctcacagccggcaacagagttccttgggcgcgggctcgtctgaagtacttcagccag
ggtgttaacaaagcctctctggaggccatcgagacatcagccttcttcctcacccttgac
gacgaggcgcacggttacgaccctgacaagctgagatcattggacctgtacgccaagtcc
ctgctgcacgggaagtgctatgacaggtggtttgacaaatccttcaccctgatcgcttat
aagaacggtaaactgggggtcaatgcagaacacgcgtgggcagacgctcccattgtagga
cacatgtgggagtacgtcctagcaacggactgcttccatctgggctacacagaggagggg
cactgcaaaggagacatcagcaagggcctgcctccccccgccaaactacaatgggacatt
ccattggagtgccaggaggtcatcgaggattcctacatggttgcaaaggagatagctgat
gatgtggacttccattgctgtctgtttgatgagtttgggaaaggcctgatcaagaacagt
aggaccagtcctgatgccttcatacagctagcactgcagctggctcaattcagggataag
ggggagttctgtctgacgtatgaggcctcgatgacccggatgttccgtgagggtaggaca
gagacggttcgctcctgcaccatagaatccacagctttcgtcagagccatggaggacaag
aacactaagagtgcccagaggttggacctcttccggaaggctgcagacaaacaccagaac
atgtatcgtctggccatgacaggctctggcatcgacagacacctcttctgtctctacatc
atgtccaagtacctcagcatcgactcaccattcctcaaacaggtgttgtcagagccctgg
aggttgtccactagtcagactcctcaacagcagctcaacatggtcgacatcaacaagttc
cccagatacgtgggggcaggaggggggtttggccctgtggctgatgacggctatggcgtc
tcttacatcattgtaggagagaacctcatcacattccacatctccagcaagttctccagc
cctgagacagactcgtaccgctttggacagaacattcgacaggccatgctggacattcgt
gcgctattcgaccaaaaagacaagaaagagatgtga
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