KEGG   Coregonus clupeaformis (lake whitefish): 121531987
Entry
121531987         CDS       T08357                                 
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250  Viral life cycle - HIV-1
cclu03272  Virion - Hepatitis viruses
cclu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    121531987 (tsg101a)
   03272 Virion - Hepatitis viruses
    121531987 (tsg101a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121531987 (tsg101a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cclu04131]
    121531987 (tsg101a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cclu04147]
    121531987 (tsg101a)
Membrane trafficking [BR:cclu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    121531987 (tsg101a)
Exosome [BR:cclu04147]
 Exosomal proteins
  Proteins found in most exosomes
   121531987 (tsg101a)
SSDB
Motif
Pfam: UEV Vps23_core DUF3450 Het-C UQ_con FapA SlyX Exonuc_VII_L TPR_IF140_C Xpo1 DUF724 CHASE3 FlaC_arch Spc7 DUF5685 Prominin DUF6468 Nsp1_C EMP24_GP25L CCDC90-like S6OS1 CCDC138_cc
Other DBs
NCBI-GeneID: 121531987
NCBI-ProteinID: XP_041693547
LinkDB
Position
19:15732405..15761606
AA seq 390 aa
MAVVNEGALKKMLKQYKYRDLTVREITNVISQYKDLKPVMDSYVFNDGSTRTLMSLTGTV
PVSYRGNIYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQAPYQAFQAAGPPNPSYMPGMPVVSPYGPNPN
PGGYPGYPYPSANSYPATAGTTHYTSQIPASTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEEMVSRLDQEVAEVDRNIDLLKRKDEELSE
ALEKMENQSENNDIDDVIVPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggcagttgtcaacgaaggcgcattgaagaaaatgctcaagcaatacaaatacagggac
ctgactgttcgtgagataaccaacgtcatctcccagtacaaggacctgaagcctgttatg
gattcctatgttttcaatgatggctccactagaactctgatgagcttaacaggaacagtg
ccagtcagctacagaggaaacatatataacatcccagtgtgtctatggctgctggacacc
tacccctacaaccctcccatctgttttgtgaagcccaccagtgccatgatgatcaagacg
ggcaaacacattgacgccaacggcaagatctacctgccctatctgcacgagtggaaacat
ccccagtccgacctgtatggtctgatccaggtgatgatcgtggtgtttggggaggagccc
cccgtgttctcccgccccaccacacaggccccctaccaggccttccaggctgccggaccc
cccaacccatcctacatgccaggtatgccagtggtctccccgtatggaccaaaccccaac
cctggtggctatccggggtacccataccctagtgcaaactcgtatcctgccacagctggc
actacacactacacttcccagattcctgcctccactgtgggccccagtagggatggtacc
attggcgaggacaccatccgcgcgtcgctgatctcggcggtgagcgacaagcttcgctgg
aggatgaaggaggagatggaccgggcgcaggccgagttggacgcactgaagaggaccgag
gaggacctgaagaagggacaccagaaactggaggagatggtctcacggctggaccaggaa
gtggcggaggtggacaggaacatcgacctactgaagcgtaaggacgaggagctgagcgag
gcgctggagaagatggagaaccagtcggagaacaacgacatcgacgatgtaatcgtgccc
acggcgccgctctacaagcagatcctcaacctgtatgctgaggagaatgccatcgaggac
accatcttctacctgggagaggcgctgcgccgcggggtcatagacctggaggtgttcctc
aagcatgtgcgtctgctctcccgaaagcagttccagctgcgagccctcatgcagaaagca
cgcaagaccgccggccttagtgacctctactga

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