Coregonus clupeaformis (lake whitefish): 121532051
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Entry
121532051 CDS
T08357
Name
(RefSeq) cadherin EGF LAG seven-pass G-type receptor 1-like
KO
K04600
cadherin EGF LAG seven-pass G-type receptor 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121532051
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121532051
04515 Cell adhesion molecules [BR:
cclu04515
]
121532051
Peptidases and inhibitors [BR:
cclu01002
]
Mixed peptidases
Family P2
121532051
G protein-coupled receptors [BR:
cclu04030
]
Adhesion receptor family
Cadherin EGF LAG (CELSR)
121532051
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Major cadherins
121532051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
7tm_2
GAIN
Cadherin_CELSR2_9th
Laminin_G_2
Laminin_G_1
EGF
GPS
HRM
hEGF
EGF_laminin
EGF_TEN
Dicty_CAR
Fibulin_C
T4SS_pilin
Motif
Other DBs
NCBI-GeneID:
121532051
NCBI-ProteinID:
XP_041693633
LinkDB
All DBs
Position
19:complement(35201931..35303190)
Genome browser
AA seq
3080 aa
AA seq
DB search
MELQMLWLWICFLSHVPVLAFFDVHVSDTFQPGVVLGNVSLGRGWIYQIDRTLTPKYVRH
IFNIERQHGIVYFSGKVNCAQLPRNPAPLYIQIKSITSENFILIHFNTFVHGQNCLIKYR
RKSAEGNPDIYMNVLTKVETSPCVSTSILLLNIYEHLPLFTRKPHSYRSLCKGGNWKVVF
DNGSFSPNCLQYNERNELDLFCRVQHLWNYTTVRVKMRFNSLHSHAMFTDRDLGRLDSLT
KRKKRNVNTAPQFQLPNYQVSVPENEPAGTRVITLKALDTDNGDAGEVEYDMEALFDSRS
NNYFQINLQTGSITTLQHLDREVKDTHVFKVIATDNGIPKRSATAYLTVTISDTNDHGPV
FEQTEYRVSIRENVEVGFEVLTIRATDGDAPSNANMIYKIVNEEEDNAGFEIDPRNGLVK
IRVRPDRETLTQYQLIVEANDQGKDPGPRSATATVYISVEDENDNYPQFSEKRYVVQVLE
SVAVNTKVAQVKATDKDEGNNAKVHYSIISGNVKGQFYIHSPTGDIEIINPLDYEIIREY
NLRIKAQDGGRPPLINGTGMVVVQVVDVNDNAPMFVSTPFQATVLENVAVGYSVIHIQAI
DADSGDNSHLEYRLTDMAPGFPFTINNSTGWITVSVELDRETTDFYTFGVEAVDHGVPAM
SSSASVSVTVLDVNDNVPTFTQRLYSLKINEDAVVGTSVLALSAIDRDANSVVTYQISSG
NTRNRFAITSQTAAGVITLALLLDYKQERQYVLTVTASDGTRYDTAQVFINVTDANTHRP
VFQSANYQVMISEDRPVGSTVVVISATDEDTGENARISYVMEDNVPQFKINPDTGCITTQ
IEIDYEDQASYTLAIIARDNGIPQKSDTTYVEIIILDANDNAPQFLRDIYQGSVFEDAPV
YTSVLQISASDRDSGSNGRLSYTFQGGDDGEGDFIIEPYSGIIRTARKLDRENVPVYNLK
AFAVDKGVPPLKAAVDVHVSILDINDNAPVFEKYELYVCVVENSPVGSIVARITATDPDE
GTNAQILFQIVEGNVPEVFQLDIFNGDLIALTDLDYESKMEYTIVVQATSAPLVSRAIVH
IRLLDVNDNYPVLRDFEIIFNNYITNRSNSFPAGVIGKVPAQDPDVSDNLHYSFVEGNQL
SLLILNQDTGDLRLSRDLDNNRPLEATMKISVTDGVHRVMALCTLRVTIITDEMLTNSIT
VRLENMSQERFLSPLLAHFMEGVAAVLSTSRTGVFVFNIQNDTHVQGSILNVTFSALRPS
GGNEVGGSGGTISTGRFFPSEALQEQIYLNRTLLTLVSSQRVLPFDDNICLREPCENYMK
CVSVLRFDSSAPFVSSDTVLFRPIQPVTGLRCRCPAGFTGDYCETEIDLCYSGPCQNNGK
CRSREGGYLCECPEDFTGEHCEVNSRSGRCVPGVCQNGARCVDLLVGGFVCQCPPGEYQK
PYCEMSTRSFPGQSFITFRGLRQRFHFTVSFMFATRERNVLLLYNGRFNEKHDFIALEII
EEQIQLTFSAGEVKTKVSPFVLGGVSDGQWHRVQLHYYNKPNIGRLGFPHGPSGEKVAVV
AVDDCDIAMAIRFGGQIGNYSCAAQGMQTGQKKSLDLTGPLLLGGVPNLPEDFPVRNRNF
VGCMRDLTIDSKTVDMASFVANNGTAAGCTAKKDFCTKSVCLNGGMCVNKWSTYSCDCPL
GYGGKNCEQVMPSPQHFDGQALVWWREPEVTIAVPWYMGLMFRTRQSSGTLLQANAGDFS
KIHILISGKHVRFQVFLGVKRVALLDFPQVRVNDGEWHHVLVELKSIKDGKDIKYMALVS
LDYGMFQRSVEIGNELPGLRLRSLFVGGLMKKDGTVQNGLKGCMQGVRMGETSTNLANVN
MRQGQKIRVEEGCEVANPCTANACPEHSRCTDNWSSYTCVCHPGYFGSDCVDACLLNPCQ
HVSTCVRQPSSPHGYSCQCGHNSYGQYCQNKANLPCARGWWGNSICGPCNCDVSKGFYRD
CNKTTGECRCKDNYYRPGGRDTCYPCECFQLGAMSRSCHPHTGQCQCRTGVIGRQCNRCD
NPFAEVTSSGCMVVYEGCPKAFDAGIWWPTTQFGQPAAMKCPKGSTGTAIRHCSDENGWL
PPDLFNCTSLAFSQLKKEDEELHLNSSRMDGERSKGMASMLRSATNRTAALQGNDVKTAY
SLLTRLLQYESQQLGFDMAATRDIHFHENIVRAGSAILDPANRGHWEQIQRFEDGTALLL
HSFEEYAQTLAQNMRKTYLKPFTVVTENMIVSVDYLDPSNPEWTNIPRFQEIQAYPKEME
SSVRFPEFPTQQEQPEEVKAVSIAPTTDATATDDPIATATDDPIATATDASPVQSPESTE
SSTVGHQASAKKKRHAEVPGPLPVAVVIIYRTLGQLLPENYDLDRRSLRLPNRPIINTPI
VSMVVYSERVPLTIPLAQPITLEYRLLETEERTKPVCVYWNHSIAVHGTGGWSAKGCELV
FRNSTHISCQCSHMSSSAVLMDISKREHGEVLPLKIITYTTVSASLMALLITFLLLAILR
KLRSNLHSIHKNLVVSIFLSELVFLFGINQTENVFMCTVVAILLHYSYMCTFAWMFVEGL
HIYRMLTEVRNINHGHMRFYYAIGWGIPAIITSLAVGLDPQGYGNPDFCWLSVHDTLIWS
IAGPIAIVVLVNITLFFLAAKASCGKRQWTFEMSGAISSLRIAFLLLLLISATWLLGLMA
VNSDILSFHYLFAIFSCLQGVCIFFFHCIFNKEVRINLKNVLTGKKSIVEDSTATRTTLL
TRSLNGKYSFTEEDGLYRTAIGESTASLDSTVRSAHSLSSSQDRNDSGQKHTTSSRSAKN
SYRGEGDSSIFIRKRSKKDNSDSDSELSVDEHSSSYASSHSSDSDDDRGSRKHRWNNKRQ
PQHSTPKVDTVANHMKPYWPVEPPTVSESEEPCGLETLRMETKVNVKLHQDKKVNGQSPY
QNGSAPPSSPDSNQTEKRRGILKNKITYRPPLTDKNMKNRLREKLSDYNPPTISPRTTPV
PVPPSPVAPRLCTVTVGNGVLIKTPPRPPVPPRPPLSPRDLRNGVVMTTSRTTMSPLVNG
VNGVQHAQDSDSDGSNETSI
NT seq
9243 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaatgctttggctatggatatgttttctgtcacacgttccagtattagca
ttttttgatgtgcacgtttctgatacatttcagcctggagtagtgctcggaaatgtatct
cttggacggggttggatctatcaaatagacaggactttaactcctaaatacgtaagacac
attttcaatattgagagacaacacggaattgtatatttctcaggaaaagtgaattgtgcc
cagttgccgaggaacccagctccgctttacattcagataaaatcaattacctcggaaaac
tttattttaattcacttcaatacttttgtgcatggacaaaattgtttaattaaatatagg
agaaagagcgccgaaggtaaccccgatatttacatgaacgttctcacaaaagtagagaca
tcgccatgcgtctccaccagtattttgctgttgaacatttatgaacatttaccactattt
actcgaaaacctcactcttatcgttcattatgtaagggagggaactggaaagttgttttt
gataacgggagtttttctccaaactgtctgcaatacaatgagcggaacgagttggattta
ttctgcagagtgcaacatctatggaattacaccactgtccgtgtgaaaatgcgatttaat
tctctacatagtcatgccatgtttacagacagggatttggggagactggattcattgacc
aaacgtaaaaaaagaaatgtgaatactgctccccagtttcaactgcccaactatcaggtg
tctgtcccggagaacgaacccgcgggaactcgcgtaattacgctcaaagcactggatacc
gacaatggagatgctggtgaggttgaatatgatatggaagctctgttcgatagccgatcc
aataattatttccaaataaatttgcagaccggcagcatcacaactttgcagcatttagac
agggaggtcaaggatacacatgtattcaaagttattgctacagacaatggcatccctaaa
aggtcggccactgcttacctcactgtcactattagtgacactaatgatcatgggcctgtg
tttgagcagacagagtacagggtcagcattagggagaacgtggaggtaggctttgaagtg
ttgactataagggcaacagatggggatgccccatcaaatgccaacatgatctataagatt
gtgaatgaggaagaagataatgctggttttgaaatcgaccctagaaatggactagtcaag
attagggttcggcctgacagagaaaccttgacccagtatcagctgatagtggaggccaat
gatcagggtaaagacccaggcccccgcagtgccacagctacagtgtatatctctgtggag
gatgagaatgataactacccccagttcagtgagaagaggtatgtagtccaggtgcttgag
agtgtggcagtgaacaccaaagtggcccaggtgaaggccacagacaaagacgagggtaac
aatgcaaaagtccactacagcatcatcagtggcaacgtgaagggccagttctacatccat
tcccctacaggtgacattgaaataatcaaccccctagattatgagataatcagggaatac
aatttgagaataaaggcacaggatgggggcagaccacctctgattaatggcacagggatg
gttgtagtacaagttgtggatgtcaacgataacgcacctatgtttgttagcacaccattt
caagccacagtattagaaaatgtggctgttggttattctgtgatccatattcaggctatt
gatgcagactccggtgacaactctcatttggagtacagactaacagacatggctccaggc
ttccccttcaccatcaacaacagcacagggtggattacagtcagtgtagagctggacagg
gagaccactgacttttacacttttggcgtagaagcagtggatcatggggttcctgccatg
tcttcctcggccagcgtcagtgtgacggtgcttgacgtgaacgacaatgtccccactttc
actcagagattgtatagcctgaaaattaatgaggatgctgtggttggtaccagtgtgcta
gcactttctgccattgatcgggacgccaacagtgtggtaacataccagatctccagtggc
aatacgcggaacaggtttgccatcaccagtcagactgctgcgggagttatcaccctggca
ctgctgctggactataaacaggagcgccagtatgtcctgacggtgaccgcctcagatggc
acacgctacgacacagcgcaggtctttatcaacgtcactgatgccaacactcaccggccc
gtgttccagagtgccaactaccaggtgatgatcagcgaggaccggccggtgggctccacg
gtggtggtaatcagtgccacagatgaggacacaggagagaacgcccgcatcagctatgtc
atggaggataacgtgccacagttcaagatcaaccccgacacaggctgcataaccacgcag
atagaaatcgactatgaggatcaggcctcctacacgctagctatcattgcccgcgacaat
ggcatcccccagaaatctgacaccacatatgtggagatcatcattctggacgctaacgat
aatgcgccacagttcctcagggacatataccaggggtccgtgtttgaggatgcacctgtg
tacaccagcgtcctccagatttctgcttctgacagggactcagggtctaatgggaggctt
agttacacctttcagggtggggatgatggagagggggacttcatcattgagccgtactct
ggcatcattagaacagccaggaaactggacagggagaatgtgcctgtgtacaacctgaag
gcctttgctgtggataagggggttccgcctcttaaggcagccgtggacgtccatgtatcc
atcctggacatcaacgacaatgctcctgtgtttgaaaagtacgaactgtacgtctgtgta
gtggagaacagtcctgtgggttccatcgtagcccgcatcaccgctacagatcccgacgag
ggaaccaacgcgcagatcctgttccaaatagtggaaggaaacgtcccagaggtcttccaa
ttagacatcttcaacggggatctaatcgcccttactgatttagactacgagtcgaagatg
gagtacacaatcgtcgtccaggcaacctctgcaccgttagtcagccgcgccatcgtgcac
atccgcctgctagacgtcaacgacaattaccctgtcctacgtgactttgagatcatcttc
aacaactacatcaccaacaggtccaacagctttccggctggggtgatcgggaaggttccg
gcccaggacccagatgtctcagataacctccactacagttttgtggaaggcaaccagctg
agtctactcatcctgaaccaggacacaggggacttgaggctgagcagagacctggacaac
aaccggccccttgaggccaccatgaagatatcagtcacagacggtgtccaccgcgtcatg
gccctctgcaccctgcgtgtcaccatcatcaccgacgagatgctgaccaacagcatcact
gtgcgcctggaaaacatgtcccaggagcgctttctgtcgccgctcctcgcccacttcatg
gagggtgtggcggccgtcctgtccaccagccgcaccggtgtcttcgtctttaacatccag
aacgacacccacgtccaggggagcatcctcaacgtcaccttctccgccctgcgcccttct
gggggaaacgaagttggggggtccgggggcaccatctccactggaagatttttcccctca
gaagccctgcaggagcagatttacctgaaccggactctgctcaccctggtgtccagccag
cgtgtgctgcctttcgacgataacatctgcctccgtgagccctgtgagaactacatgaag
tgtgtgtcagtgctgaggttcgacagctcggcgcccttcgtgtcctcggatacggtgctg
ttcaggcctattcaaccggtgacggggctgcgctgccgatgcccagcaggcttcacgggg
gactactgtgagacggagattgacctgtgctactcagggccctgccagaacaacggcaag
tgccggagcagggaaggcgggtacctttgcgagtgtccggaggacttcacaggtgagcat
tgtgaggtgaactcacgctctggccgatgcgtcccgggggtgtgtcaaaacggggccagg
tgtgtggacctcctggtgggggggttcgtgtgccagtgccccccgggggagtaccagaag
ccttactgtgagatgagcacccgcagcttccccggccagtccttcatcacctttagaggg
ctacgacagaggttccacttcactgtgtccttcatgtttgccaccagagagaggaatgtc
ctactgctttataacggaaggtttaacgagaagcacgacttcatcgccttggagatcatc
gaggaacaaatccagctcaccttctcagcaggagaagtcaaaaccaaggtatcacccttt
gtcctaggtggggtcagtgatggccagtggcatagagtacagctacactactacaacaag
cccaacattggtcgccttggctttcctcacggaccatcaggtgagaaggtggcagtcgtt
gccgtggacgactgcgacatcgccatggcgattcgctttggtggccagatcgggaactac
tcttgtgccgcccagggcatgcagacaggacagaagaagtccctggacctcaccggtccc
ctactcctgggtggcgttcccaacctgccggaggatttccctgtccggaaccgaaacttt
gtgggctgcatgagagacctaaccatagacagcaagactgtggacatggccagttttgtg
gccaacaacggcacggccgccgggtgcacagcgaagaaggacttctgcactaaaagtgtg
tgtctgaacggaggaatgtgtgtgaacaagtggagtacgtactcctgtgactgtccccta
ggctacggagggaagaactgtgaacaagtcatgccatcccctcagcactttgacggccaa
gccctggtgtggtggcgcgagccagaggtaaccatcgccgtgccctggtacatgggtctg
atgttcaggaccaggcagagctctggcaccctgctgcaggccaacgctggagacttctcc
aagatacacatcctgatcagcggcaaacatgtgcgtttccaggtgttcctgggggtgaag
cgggtggccctgctggacttccctcaggtcagggtgaacgatggggagtggcaccacgtc
ctggtggagctgaagagtatcaaagacggaaaggacatcaaatacatggccctggtgtca
ctggactacggcatgttccagaggtcagtggagataggcaatgagctgccaggcctcagg
ctgaggagtctgtttgtggggggcctgatgaagaaggatgggacggtccagaacggactc
aagggctgcatgcagggcgtgcggatgggcgagacttccaccaacctggccaatgttaac
atgcgtcagggtcagaagatccgggtggaggagggttgtgaggtggctaacccctgcacc
gctaacgcctgccctgagcacagccgctgcaccgacaactggagctcatacacctgtgtg
tgccaccccggatacttcgggagtgactgtgtggatgcatgtctcctgaacccctgtcag
catgtgtccacctgcgtccgccagcccagctccccccacggctacagctgccagtgtggc
cacaactcctatgggcagtactgccagaacaaagccaacctaccctgtgctcgcggctgg
tgggggaactctatctgtggcccatgtaactgtgatgtcagcaaagggttctaccgagac
tgcaacaagaccactggggagtgtcgctgtaaggataactactaccggcccgggggaagg
gacacctgctacccttgtgagtgtttccagcttggcgcgatgtcccgctcctgccacccc
cacacgggccagtgccagtgcaggacaggcgtgatcgggcgccagtgcaatcgttgtgac
aacccctttgctgaggtcacctccagcgggtgcatggttgtgtatgagggctgtcccaaa
gcctttgatgcagggatctggtggccaacgacccagtttggacaacctgctgccatgaag
tgtcccaaaggatccactggcacggccatccgccactgcagcgacgagaacggctggctg
cctcccgatctcttcaactgcacctctctcgccttctctcagctgaaaaaagaggatgag
gagctgcacctcaatagctccaggatggatggagagaggtcaaaggggatggccagcatg
ctgaggagtgccaccaaccgcacagcggccctccagggcaacgacgtgaagacggcctac
agcctcctgacccgcctgctgcagtacgagagccagcagctgggcttcgacatggccgcc
acaagagacatccacttccatgagaacatcgtccgagcgggcagtgccatcctggaccct
gctaacagggggcactgggagcagatccagcgtttcgaagatggcacggccctacttctg
catagctttgaggagtacgcccaaacactggcacaaaacatgaggaagacctacctgaaa
cccttcactgttgtcacagaaaacatgattgtttctgtggattacttggacccgtccaat
ccagaatggacaaacatcccgcgtttccaagagatccaggcctatcccaaagagatggaa
tcctccgtccgcttcccagagttcccaacacagcaagagcagccagaggaggttaaagca
gtctccatagcaccaaccacagacgcaacagccacagatgaccccatagcaacagccaca
gacgaccccatagcaacagccacagacgcctctcctgtccagagtccagagtccactgaa
tcctccactgtcggtcaccaggcgtctgccaagaagaagcgtcacgctgaggtcccaggc
cctctccctgttgctgtggtgatcatctataggaccctgggacagctcctgcctgaaaac
tacgaccttgatcgtaggagcctgagactccctaaccggcccatcatcaacaccccaatt
gtgagcatggtggtttacagtgagagggtgcccttgaccattcctcttgcacaacccatc
acactggaatacagactcctggagacagaggagaggaccaaacctgtctgtgtctactgg
aatcattccatcgcggttcatggaactggaggctggtctgccaaggggtgtgagcttgtg
ttcaggaacagcactcacatcagctgccagtgcagtcacatgtccagctctgctgtgctc
atggacatctccaagagagagcatggggaggtcctgcccctgaagatcatcacctacacc
actgtgtcagcctcgctaatggcacttctcatcaccttcctcctgctggccatcctccgg
aagctccgctccaacctccacagcatccacaaaaacctggtggtgtccatcttcctctcc
gagcttgtcttcctcttcggaatcaaccagactgagaatgtgttcatgtgtacagtggta
gccatcctgctgcactactcctacatgtgtacatttgcctggatgtttgtggagggactt
cacatctaccgcatgctgactgaggtccgcaacatcaaccatggccacatgagattctac
tatgccattggctggggcattcctgccattatcaccagcctggcagtagggttggatcct
cagggttatggtaacccagacttctgttggctttctgtccacgacacactcatctggagt
atcgctgggcccatcgctatagtagttctagtcaacattactttattcttcctggcagcc
aaggcctcgtgcggaaagagacagtggacatttgagatgtctggagcaatctcttctcta
cgcatagccttcctcctcctgttactcatcagtgctacctggctgctgggcctcatggca
gtcaatagtgatatactctccttccactacctctttgccatcttcagctgcctccagggt
gtgtgcatcttcttcttccactgtattttcaataaggaagtgaggatcaacctgaagaac
gtcctcacagggaagaagtccatagtggaagattctactgccacccgcaccactttactc
acacgttctttaaacggtaagtactcgttcacggaggaggacggtctgtaccgcacggcc
attggagagtccactgcctccctggacagcacggtcagatcagcccacagcctcagcagc
agccaggacaggaatgactcagggcaaaagcacactacatcctcccgctcagccaaaaat
agttaccgtggagagggagactcctccatcttcatccgcaagcgttccaagaaagataat
tcggattcggacagcgagctctcggtggatgagcacagtagctcctacgcctcgtcccac
tcctcagacagtgatgatgacagagggagccgcaagcatagatggaacaacaagagacag
ccccagcacagcacacccaaagtggatacggtggccaatcacatgaagccttactggcca
gttgagccaccgacagtcagtgagagtgaggagccctgcgggttggagacactacgtatg
gagaccaaggtcaacgtgaagctccaccaggacaaaaaagtcaatgggcagtccccctac
cagaacggtagtgcccctcccagctcacctgacagcaaccagacagagaagagaaggggc
attctgaaaaacaagatcacctaccgtcctccgctgactgacaagaatatgaagaatcgc
ctgcgggaaaaattgagcgactacaacccccccaccatctcccccagaactaccccagtc
cctgtccccccatctcccgtcgccccccgtctctgcactgtaaccgtgggaaacggggtc
cttatcaaaaccccacctcgcccacccgtgcctccacgtcctccgttgtctccacgggac
ctgcgcaacggggttgtcatgacaacgtcgaggacgacgatgtcgccattggtcaatggt
gtcaacggggttcaacacgcccaagactcggactcagatggtagcaacgaaacctcaatc
tga
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