Coregonus clupeaformis (lake whitefish): 121532059
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Entry
121532059 CDS
T08357
Name
(RefSeq) ATP-binding cassette sub-family C member 8-like isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121532059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121532059
Transporters [BR:
cclu02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
121532059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
ABC_ATPase
nSTAND1
AAA_23
Beta-prop_IFT122_1st
TraD_N
Motif
Other DBs
NCBI-GeneID:
121532059
NCBI-ProteinID:
XP_045083112
LinkDB
All DBs
Position
19:34674399..34842823
Genome browser
AA seq
1624 aa
AA seq
DB search
MISRYKSSPGSTMSLAFCGNENNSLAYNVDSGVLNNGCFLDALNVVPHIFLLFITFPILF
IGWGSQSSKVHIHHSTWLHFPGHNLRWLLTFILLFVLVCEIAEGIVSDGFTQSLHLHLYM
PAGLAFMAGITSIIYYHNIETSNFPKLLLALLFYWVLAFLMKTIKFAKYTEHGIGLRQLR
YCITGLLALLYGLLLAVEINVILGRRYLCFTEATEVKPPEDLQDLGVRFLQPFVNLLSKA
TYWWMNTFITAAHRRPIDLKVIGKLPIAMRALTNYLKLRKAFESQRVKRPLGSMPQDPKW
IWRALCQAFGRPLIISITFRFLADLLGFAGPLCISGIVHHISKENPTIQPPIKLLGVYFI
SSQEFLANAYVLAVLLFFALILQRTFLQASYYVAIETGINLRGAIQTKIYNKIMRLCTSN
MSMGELTVGQICNLVAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYLLGISALIGATV
IAVLAPVQYFVATKLSQAQKSTLEYSSERLKKTNELLRGIKLLKLYAWEHIFCHSVEETR
AKELTSLEAFALYTSISIFMNAAIPIAAVLTTFVVHVHISEEADLSPAVAFASLSLFHIL
VTPLFLLSSVVRSTVKAVVSAQKLSEFFSSDEIGDEQEPNATMPAGPSNHNSKYQAVLSF
KKPKPCPAPSLRPSQPLKVVNRKRPPREDCWNNYSHKGGNPPPQERDQDLCIRITSGYFT
WTDGPPTLSNIDIKVPFGQLTMIVGQVGCGKSSLLLAALGEMQRVSGTVTWNSLPSLDSE
GDERYVSEGDESLTSDKDAAGDGDIQKRGPVAYASQKPWLLNATLVENITFEMPMIKPRY
NAVIEACSLQPDIDILPQGDQTEIGERGIILSGGQRQRIGVARALYQQANVVFLDDPFSA
LDIHLSDHLMQEGILKLLREEKRTVVLVTHKLQYLPHADWIIAMKNGTTQTEGTLKDIQN
SEPELFEQWKTLMHRQDGEFEKETVPESMTVLERKNLRRAMYSKEAAKTEEEDTEDSVDS
DEDDNLSQAMRHRATIPWRSCGVYLSSAGLLLLSLLLLSQLFKHSLMVAIDYWLAHWTSH
VINAKMEATGRNCTVAQECGFNHSWYLSVFSVLCCLGIVLCLVTSVAVEWTGLRVAKELH
HNLLSKIILAPMRLFETTPLGSILNRFSSDTNTIDQHIPATLECLSRSTLLCVSALGVIS
YVTPVFLIALVPLAIACYFIQKYFRVASRDLQQLEDSTQLPLLSHFSETVEGLTTIRAFK
YEPRFRQRLLEFTDANNIASLFLTAANRWLEVRMEYIGACVVLIAAVASITNCLYNHLST
GLVGLGLTYALMVSNYLNWMVRNLADMEVQLGSVKRINGLLKTEPENYEGLLTASQVPDG
WPQQGEIQIENLSVRYDTTLKPVLKQVNAHISPGQKVGICGRTGSGKSSFSLAFFRMVDM
FEGRIIIDDIDIAKLPLQTLRSRFSIILQDPILFSGTIRFNLDPEKKATDDMLWEALDIA
QLKPVVKTLPGGLDATVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATES
ILQKVVMTAFADRTVVTIAHRVHTILKADLVIVMKRGLILEYDRPQALLEKEDSVFASFV
KADK
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgatctcacgatacaaatcgagtcccggttccaccatgtccttggcgttctgtgggaac
gagaacaactcgttggcgtacaacgtggacagcggcgttctcaacaacggttgcttcctg
gacgcgctcaacgtggtcccgcacatcttcctgctcttcatcaccttccccatcctcttc
atcggctggggcagccagagctccaaggtgcacatccaccacagcacctggctgcacttc
cctggtcacaacctgcgctggctcctcaccttcatcctcctcttcgtcctggtctgtgag
atcgcagagggcatcgtctctgatgggttcacccagtccctccacctgcacctgtacatg
cctgcaggcctggccttcatggctgggatcacctccatcatctactaccacaacatcgag
acctccaacttccccaagctactgttagctctactgttctactgggtcttggcctttctg
atgaaaaccatcaagtttgccaagtacacggagcacggcatcggcctgagacaactccgc
tactgcatcacaggactcctggccctgctctacggactactgctggctgtggagatcaac
gtcatactgggcaggcgctacctgtgtttcactgaggctacggaggtgaaacccccagag
gacctgcaggacctgggggtgaggttcctgcagccctttgtcaacctgctgtccaaggcc
acttactggtggatgaacaccttcatcacggcagcccaccgccgccccatcgacctcaag
gtcatcggcaaactgcccatcgccatgcgagccctcaccaactatctgaagctccgcaag
gctttcgagagtcagagggtaaagaggcctctgggctccatgccgcaggaccctaagtgg
atctggagggccctatgccaggcgtttggacgtcccctcatcatcagcatcaccttccgc
ttcctggctgacctgctgggcttcgctgggcccctctgtatctctggcatcgtccaccac
atcagcaaggagaatcccaccatacagcccccgataaagctgctgggggtctactttatc
tcctctcaagagttcttggcaaatgcatacgtgctggctgtgctgctgttcttcgccctg
atcctgcagagaaccttcctccaggcctcgtattatgtggccatcgagacgggcatcaac
ttacgaggggctatacagactaagatctacaataagataatgcggctgtgcacctccaac
atgtctatgggagaactgactgtgggacagatctgcaacctggtagccatagataccaac
cagctcatgtggttcttcttcctctgtcccaacctgtgggccatgccagtccagatcatt
gtgggagtgattctgctctactacctcctggggatcagtgccttgatcggggccacagtc
atcgctgtcctggcccctgtccagtactttgtggccaccaagctgtcccaagcacagaag
agcaccctggagtactccagcgagcggttgaagaagactaatgagctgctgcggggcatc
aagctgctgaagctgtacgcctgggaacacatcttttgtcacagtgtggaggagaccagg
gccaaggagctcaccagcctggaggccttcgccctctatacatccatatctatattcatg
aatgcagccatccctatcgcagctgtcctgaccacgtttgtggtccatgtgcacatctct
gaggaggctgacctgtcccctgctgtggcctttgcgtccttatccctgtttcacatcctg
gtcactcctctcttcctgctctccagcgtggtgcgatccacagtcaaggctgtggtcagt
gcccagaagctgagtgagttcttcagtagtgatgagattggagacgagcaggagcccaac
gctaccatgcccgctggtcccagcaaccacaacagcaagtatcaggctgtgttgtccttt
aaaaagcctaagccatgccctgccccctccctgcgcccctcccagcccctgaaggtggtg
aacaggaagagaccccccagggaagactgctggaacaactacagccacaagggaggcaac
ccgcccccccaggagagggaccaagacctctgcatcaggataaccagcggatatttcacc
tggacagacggacctcccaccctgtctaacatagacatcaaggttccctttggtcagctg
actatgatcgtgggccaggtgggttgtgggaagtcgtccctgctgctggcagctctggga
gagatgcagagagtctctgggactgtcacctggaacagtttgcccagcctggactctgag
ggagatgagaggtatgtgtctgaaggagacgagagcctcacatcagacaaggatgcagct
ggtgatggagatatccagaagagaggccctgtggcctatgcttcccagaagccctggctg
ctcaatgcgacgctggtggagaacatcacctttgagatgcctatgatcaaacccaggtac
aacgctgtcattgaggcgtgttccctgcagccggatatcgacatcctgccacagggagac
cagacggagatcggagagaggggtataattctatctggagggcagcgccagcgtataggt
gtggccagagccttgtaccaacaggccaacgtggtcttcctggatgacccgttttcagcg
ctggacatccacctgagtgaccacctgatgcaggagggcatcctcaaactgctgagagaa
gagaagagaactgtggtgttggtcactcacaaactacagtacctaccacatgccgactgg
atcattgcgatgaagaatgggaccactcaaaccgaggggactctgaaagacatccagaac
tctgagcctgagctgtttgaacagtggaagaccctgatgcaccggcaggacggcgagttt
gagaaggagacagtgcctgagagtatgacggtgttggagcgtaagaacctgcggagagcc
atgtactccaaagaggctgccaagactgaggaggaggacacagaagactctgtggacagt
gacgaggacgacaacctgtcccaggccatgcgtcaccgcgccaccatcccctggcgctcc
tgtggggtctacctgtcctctgcaggtcttctcctcctgtcgctgctcctcctatcacag
cttttcaaacactccctcatggttgccatcgactactggctggcccactggacctcccac
gtcatcaatgccaagatggaagccaccgggaggaactgcaccgtcgctcaggaatgtggg
ttcaaccactcgtggtacctgtcagtgttcagtgtgctgtgctgtctgggcatcgttctg
tgtctggtcacctctgtggccgtagagtggacaggcctgagagtggccaaagaactacac
cacaacctgctcagcaagatcatactggcccctatgaggctgtttgagaccactcccctg
ggcagcatcctcaacaggttctcctctgacaccaacaccatagaccagcacatccctgcc
actctggagtgtctgagtcgctccaccctgctgtgtgtgtcggcactgggcgtcatctcc
tacgtgacccctgtgttcctcatcgctctggtgcctttggccatcgcctgctacttcata
cagaagtacttccgggtcgcctctagggacctccagcagttggaggatagtacccagctc
cctctcctgtcccacttctcagagacagtggagggcctcaccaccatccgggccttcaag
tatgagcccaggttcagacagaggttactggagttcaccgatgccaacaacatcgcctcc
ctcttcctcacagcagccaatcgctggctagaggtccgcatggagtacataggcgcctgt
gtggttctgatagcagctgtggcctccatcacgaactgtctgtataaccacctctccact
ggcctggtaggactaggactcacctatgcactcatggtgtcgaactacctgaactggatg
gttcgtaacctggcagacatggaggttcagctgggttcagtcaagagaatcaatggtctg
ctgaagactgagcctgagaactacgaaggactgctcactgcatctcaggtgccggatggc
tggccacagcagggggagattcagattgagaacctgagtgtgcgttacgacaccaccctg
aaacctgtcctcaaacaagtcaacgcacacatcagccctgggcagaaggtggggatttgt
ggcaggacaggaagtgggaagtcttctttctccctggccttctttcgcatggtcgacatg
ttcgaggggcgtatcatcatagatgacattgacatcgccaagctgcctctgcagaccctg
aggtctcgattctccatcatcctccaggaccccatcttattcagcggaaccatccggttt
aacctggacccagagaagaaggctactgatgacatgctgtgggaggctctggacatcgct
cagctcaaacctgtggtcaagactctaccaggaggactggacgccacagtgacagaggga
ggggagaacttcagccagggccagagacagctcttctgtctggccagagccttcgtcagg
aagtctagcatcctcatcatggacgaagccacagcctctatagacatggccacggaaagc
atcctacagaaggtggtgatgactgccttcgctgatagaacagtggttactatagcacat
cgtgtccacaccatcctgaaagcagacctggtgatagtgatgaagagaggactaattcta
gaatacgacagaccccaggcgctgctggagaaagaggacagtgtcttcgcctccttcgtc
aaggcggacaagtga
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integrated database retrieval system
