Coregonus clupeaformis (lake whitefish): 121532069
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Entry
121532069 CDS
T08357
Name
(RefSeq) proteasome subunit alpha type-1-like
KO
K02725
20S proteasome subunit alpha 6 [EC:
3.4.25.1
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
121532069
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121532069
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cclu03051
]
121532069
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121532069
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
121532069
Peptidases and inhibitors [BR:
cclu01002
]
Threonine peptidases
Family T1: proteasome family
121532069
Proteasome [BR:
cclu03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
121532069
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121532069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
Motif
Other DBs
NCBI-GeneID:
121532069
NCBI-ProteinID:
XP_041693672
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All DBs
Position
19:34192560..34207142
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AA seq
262 aa
AA seq
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MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSRTHAVLVALKRAQSELAAHQ
KKILHVDEHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPASRLVTLIGSKTQIPT
QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMDTFL
DCNLNELVRHGLLGLRETLPAEQDLTTKNVSIGIVGKDMEFTIYDDGDVGPFLEGLEERP
QRKVIEAADEPAADKPDEPMDI
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaaccagtacgacaacgatgtcacagtatggagtcctcaggggcgcattcac
cagatcgaatacgccatggaggcggtaaaacaaggttcggctacagtgggcctcaagtcc
agaacccatgcagtcctggttgctctcaagagagcccagtcagagctggctgctcaccag
aagaagatcctccatgttgatgaacacattggcatctccattgccgggctgactgcagat
gccaggctcctctgtaacttcatgaggcaggaatgcctggactcaaggtttgtgtttgac
aggcctctcccagcttcgcgcctcgtcactctcatcggaagcaaaactcaaattcccaca
cagaggtatggaagaagaccctatggtgtgggactgcttatcgctggctacgatgacatg
gggcctcatatcttccagacctgcccctctgcaaactactttgactgcaaagccatgtcc
attggagcccgctcccagtctgcccgcacatacctagagagacacatggacaccttcctg
gactgtaatctgaatgagctggtcaggcatggtctgcttgggctcagagaaacactccca
gctgaacaggacctcaccactaagaatgtctccatcggcattgtggggaaagacatggag
ttcaccatctacgacgatggtgacgtgggtcctttccttgagggtctggaggagaggcca
cagagaaaggtaatcgaggctgcagatgagcctgcagcagacaaaccggatgagccaatg
gatatctga
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