Coregonus clupeaformis (lake whitefish): 121532085
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Entry
121532085 CDS
T08357
Symbol
sv2
Name
(RefSeq) synaptic vesicle glycoprotein 2C isoform X1
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121532085 (sv2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121532085 (sv2)
Transporters [BR:
cclu02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
121532085 (sv2)
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
MFS_1_like
Motif
Other DBs
NCBI-GeneID:
121532085
NCBI-ProteinID:
XP_041693712
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Position
19:22986374..23004503
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AA seq
546 aa
AA seq
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MSRHIHIEASGDDAARAPLLTSHPELASLDSDEGEVLFERSSGDNANDVHGRRQRKLTYE
EAVEEAGFGLFHGLLLVVCGWANASDAVEILCVSFLLPTARCDLHLSSSDMGLLTANIFL
GMMIGGYMWGYLADQRGRQKVLVISLTVNGVFGALASFAPRFWLFLLLRFISGVGVGGSI
PVIFSYFSEFQPRLKRGAMISALATFWMAGNILAAGLAWLIIPRTWVRFSLGGLDFQSWR
LFVVLCSVPSLTSALIFSLAMPESPRFLMEAGRETEALHVFCRMFAINHRGSLKTFPICG
LHAPSEKKERETMRGGTHTQRFVNLLKQGLTPIRQLFVGELASRSVCLVVIFYCISFGYY
GLWMWFPELFKRAEDGGSPCANVSRLQSYDNQSCYPVKTAVYMEGFVTAASNLPGNIFTI
LLMDVIGGKALLCCSLLLSSVSVFLIYEVKTKAQSLLISCVFSGVSVVAWNSLDVLGTEL
YPTQLRSSALGFFTGVGRVAAIMGNIVFGQLVDTNCVIPVLLVSALLLTGGITALLLPST
KQAELT
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacatatccatatagaggcgtccggagatgatgcagcacgagcgccacttctc
accagccacccggagctagctagtctcgactcagatgaaggtgaagttctttttgagagg
agtagtggagataatgcaaatgatgttcatggacgtagacaaagaaaactaacatatgag
gaagctgttgaagaagcaggttttggtttgttccatgggctcctgttggtggtgtgtgga
tgggccaacgccagtgacgcggtggagatcctgtgtgtttcctttctgctgcccacggcc
cgctgtgacctccatctcagctcctcagacatggggttactgacggccaacattttcctc
ggaatgatgataggtgggtacatgtggggttacctggctgaccagagggggcgccagaag
gtcttggtgatttccctgacagtgaacggagtgtttggggcgctggccagcttcgccccc
aggttctggctcttccttctactacggttcatcagcggtgtaggggtgggaggttcaatc
ccagtcatcttctcctacttttcagagtttcagcccaggctgaagagaggggccatgata
agtgctctggccaccttctggatggcagggaatatcctggcagcaggcctggcgtggctg
atcattccccggacctgggttcgcttttctctgggtgggctggacttccagagctggagg
ctgtttgtggtgctgtgctctgtccccagcctcacatcggcactcatcttcagtctggcc
atgcccgaaagcccccggttcctcatggaggctggccgtgagacagaagccctacatgtc
ttctgcaggatgtttgcaataaaccacagaggcagtctcaagaccttcccaatttgtggg
ctgcatgccccttctgagaagaaagagagggagactatgagaggtggaacacacactcaa
cgctttgtcaacctcctcaaacagggcctgacaccaataagacagctgtttgttggagag
ttggcctctagaagtgtatgtctggtcgtcatattctactgcatctcatttgggtactat
gggctgtggatgtggttcccagagcttttcaagagagcagaggatggaggctctccctgt
gccaatgtgtctcgcttacaaagctatgacaaccaaagctgctacccagtcaaaacggca
gtgtacatggagggctttgtcactgcagcctctaacctcccagggaacatcttcaccatt
ctcctcatggacgtcattggcggaaaggccctgctttgttgcagcctattgttgtccagt
gtgagtgtgttcctcatctacgaggtgaagacgaaagctcagagtctgctcatctcctgt
gtgttcagtggagtgtctgtggtggcctggaattccttggatgtgttgggcaccgagctc
taccccacccagctacggtcctccgctctgggcttcttcacaggagtaggcagagtggca
gccatcatgggtaatatagtctttggccagttggtggacaccaactgtgtgataccagtt
ctacttgtgtctgctttgctgctgacaggggggatcactgccttgctccttccaagcact
aaacaggcagagctcacctga
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