Coregonus clupeaformis (lake whitefish): 121532119 Help Entry 121532119         CDS       T08357                                  Name (RefSeq) aggrecan core protein-like   KO K06792   aggrecan 1 Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:cclu00535]     121532119    00536 Glycosaminoglycan binding proteins [BR:cclu00536]     121532119    04091 Lectins [BR:cclu04091]     121532119 Proteoglycans [BR:cclu00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    121532119 Glycosaminoglycan binding proteins [BR:cclu00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    121532119 Lectins [BR:cclu04091]  C-Type lectins   Lecticans    121532119 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Xlink Lectin_C Sushi V-set EGF Motif Other DBs NCBI-GeneID:  121532119 NCBI-ProteinID:  XP_041693764 LinkDB All DBs Position 19:complement(30822980..30854144) Genome browser AA seq 1316 aa AA seqDB search MITLLLLWVSLPFITSTISFEDPGDLDSTLSVSIPVEVPLRPLMGAKVVVPCYFQDNTVN DPATPTVAPLSHRIKWTYITKGKATLILVASEGKVHVETEYLDRVTMANYPLVPTDITME ITELRSKDSGTYRCEVMHGIEDNYDSVDIQVQGIVFHYRAISTRYTLNFERAKAACIQNN ATIATPAQLQAAFDDGFHQCDAGWLSDQTVRYPIHEPREGCFGDKDEFPGVRTYGVREVN DTYDVYCFAQKMSGRVFYSMSIEKFTFYQAMDQCAKLGAKLATTGQLYLAWKAGMDVCNA GWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYQEDDGVVKTT PFPEVATITAGPMVYLGRTTTSEAEAQGEVQTQAPLDTTSMELPLPILPSVNDTYAKVTP VVGEEIISRVTAKPDMASEFPHDNDIAMSPTGVVFHYRAGSSRYALSFMEAQLACQSVGA VIASSQQLQAAYEAGLHNCDAGWLRDQTVRYPILSPRDKCSGNLEHLPGVRSYGLRPATE QYDVYCYVDRLKGELFYTSDYDSFSYKEAMAHCQKLNTTLATTGQLYAAWKQGFDKCRPG WLQDRSVRYPIHTPRPHCGGGKAGVHTIYAFPNQTGHPDQHSRYDAYCFRAEHTIIHTET RLNVTVVVEEEMINMTTRTDQLTLVSPIIPPVDVSGSGLAEHSASGFGSETPGSGDTFGG DSGEGSGSGFTFEGSGHILSGEGSSSGGLQEAVEGSTTVIYPPGVGSGNSGSGVGVGEFS GGQLSGVLPHSGSGSGVSGDLSGSGDSVIIMVNGEMVDISKQQPTGQEFGQGGVDVSGSS GVSGSGGFFSGDVTSTSGSGLPDISFEHSGLIDLTEKSSGEQEVSGYQPFASGYPYGFHS GSGFPSSGDGSHSGHEVIFLTEDGMMEVTTRQRPEQGRGYIEVSGDGSSHHEGSTSASGL SLGESMVAEGLSVVLPPGSTMTYPEYIGNTGRGDDLDLVEEGQEHEGQEHEGQEQEGLEG PTETINVTAPSAVFSSPTTAPANTMVTPAVVEEPAVVDADPDPCEPNPCGTGTCSVQDGI AVCQCPHGFTGEDCSTSVQGCAEGWVEFMGSCYLHFLERDTWPDAEQRCQELNSHLVSIT SQQEQEFVNSNAQDYQWIGLNDKDMQNKFRWTDGSPLEFENWRPNQPDNYFNSGEDCVVM IWHENGQWNDVPCNYHLPFTCKSEPVMCHSPPEVDNARPMGSRRDRYPVNSIVRYQCDAG FTQRHPPVVRCLPDGRWEEPQVECIGSGATPSNRLHKRSIRRRLKAPNSWSWRKLL NT seq 3951 nt NT seq  +upstreamnt  +downstreamnt atgatcaccttgctcctactgtgggtgtctctgccattcatcacctcaacaatatccttt gaagaccctggtgatctagacagtaccttgagtgtcagcatccctgtggaggtgccgctg cgccctctgatgggcgccaaggtggtggtgccctgctacttccaagacaacacggtcaac gacccggccacgcccactgtcgcccccctgtcccaccgcatcaaatggacctacatcacc aagggcaaggcaaccctcatcctggtggcgtcggagggcaaagttcacgtggagacggag tacctagaccgggtcaccatggccaactacccgctggtgcccaccgacatcaccatggag atcacggagctgcgctccaaggactcaggcacctatcgctgtgaggtcatgcacggcatc gaggataactatgactcggtggacatccaggttcaaggtattgtgttccactaccgagcc atctctactcgctacactctgaactttgagagggccaaggctgcctgtatccagaacaat gccaccatcgccaccccagcccagctacaggctgcctttgacgatggcttccaccaatgt gacgccggttggctatctgaccaaacagtcaggtaccccatccatgagcctcgtgagggt tgctttggagacaaggatgagttcccgggtgtgcgaacctatggcgtgagagaggtcaac gacacttatgacgtgtactgcttcgcacagaagatgtcaggcagagtgttctactccatg tccattgagaagttcaccttttaccaggcaatggaccagtgtgccaaactaggggccaag ctggccaccacagggcagctgtacctggcctggaaggctggcatggatgtgtgcaacgcg ggctggctggcagatagaagcgtccgctaccctatcaacatcgccaggccccagtgcggt ggaggactacttggagtgaggactgtgtacctgttccctaaccagacaggctacccctac ccagactcccgctacgacgctatctgctaccaagaggacgacggtgtagtcaagaccacc ccgttcccagaggtggccaccatcacagctggccccatggtttacctggggcgtaccacc acctctgaggctgaggcacagggggaggttcagacccaagcccccctggacaccaccagc atggaactgcccttacccatcctccccagtgtgaacgacacgtatgccaaggtcaccccg gtcgtgggggaagagatcatcagcagggtgacagctaaacctgatatggcctccgagttc cctcatgacaatgacattgccatgtctcctacaggtgtagtgttccactaccgtgctggc tccagtcgctatgccctgtccttcatggaggcccagctggcctgtcagagtgtaggtgcg gtcatcgccagctctcagcagctccaggcagcctacgaggcagggctccacaactgtgat gcaggctggcttagggaccagaccgtcaggtaccccatcctgtctcccagagataagtgc tcagggaacctggagcatctcccaggggtgaggtcctacggcctgagacccgctaccgag caatacgatgtctactgctatgtggaccgcctcaagggggagctgttctacaccagcgac tatgacagcttctcctacaaggaggccatggcccactgtcagaagctcaacaccacgcta gccaccacagggcagctctatgctgcctggaaacagggctttgacaagtgccgtccaggc tggctgcaggaccgcagcgtccgttaccccatccacacccctaggccccactgtggagga ggcaaggctggggtacacaccatctacgccttccccaaccagacgggacaccccgaccag cactccagatacgacgcatactgcttcagagctgaacatacgattattcacactgaaacc agactcaacgttactgtagttgtcgaggaggaaatgatcaacatgacaaccagaacggac caattgactcttgtgagccccatcataccacctgtggatgtgtctggttcaggcttagct gagcattctgccagtggttttggcagtgaaacccctggtagcggagatacatttggtggg gacagtggcgagggctctgggtctggcttcacattcgagggcagtgggcacatcttgtca ggagagggctctagctctggaggtctacaggaggctgtagaagggagcaccactgtcatt tacccccctggagttgggtctgggaatagtgggtccggggtgggggtgggagagttcagc ggtgggcaactgtccggtgtccttccccactccggtagtggcagcggggtatctggggac ctgagcggtagcggggattctgtcatcatcatggtgaacggagagatggtggacatctcc aagcagcagcccactggacaggagtttggacaaggaggtgtggatgtcagtggctccagt ggagtttctggatcgggtggcttcttcagtggggatgtgaccagcacctctggctctgga cttcccgacatatcttttgagcattcaggtctcatcgacctgaccgagaagtcctcggga gagcaggaggtctctggctaccagcccttcgcctccggttatccttacggttttcacagc ggctctggattcccatccagtggtgacggatcccactcaggccatgaggttatcttcctg acagaagatgggatgatggaggtgacaacacgacagcgtccagagcagggccggggctac atagaggtcagtggagacggcagtagccaccatgaagggagcacctcagccagtgggctc tccctgggggagtcaatggtcgcagaaggcctgtctgtggtgttgccccctggttctacc atgacttacccagagtatatcggaaacacgggaagaggggatgacctggacctggtggag gaaggccaggagcacgaaggccaggagcacgaagggcaggagcaagaagggctggaaggg cccacggagacaatcaatgtcacggcaccgtctgcagtcttctctagcccaacaacagca cccgccaatacaatggtgacccctgctgtggtggaggagcctgctgtagttgatgctgat cctgacccttgtgagcctaacccgtgtggcacaggcacctgttctgtgcaggatggcatt gctgtgtgccaatgcccacatggattcactggagaggactgcagcacgtcagtgcagggc tgtgccgagggctgggtggagttcatggggagctgctacctgcactttcttgagagagac acctggcccgatgctgagcagcgctgccaagagctcaactcccacctggtcagcatcacc tcccaacaggagcaggagtttgtcaactctaacgctcaggactatcagtggattggactc aatgacaaggacatgcagaataagttccgctggacagatgggagtccattggaatttgag aactggaggcccaaccagccagataactactttaactctggagaggactgtgtagtgatg atctggcatgagaacggccagtggaacgatgttccctgcaactaccacctgcccttcacc tgcaagagtgaacctgtcatgtgccattcaccccctgaggtggacaacgccaggccaatg ggcagcagaagagaccgctaccccgtcaactctatagtccgctaccagtgtgacgcaggc ttcacacagcgccacccacctgttgtacgctgccttcccgacgggcggtgggaggagcca caagtggagtgtataggatctggtgccacccccagcaacagactacacaagaggtccatc aggagacggttgaaagcacccaacagttggtcttggcggaagcttctctaa

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