KEGG   Coregonus clupeaformis (lake whitefish): 121532146
Entry
121532146         CDS       T08357                                 
Name
(RefSeq) laminin subunit beta-1-like
  KO
K05636  laminin, beta 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04510  Focal adhesion
cclu04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121532146
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121532146
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C ATG17_like
Other DBs
NCBI-GeneID: 121532146
NCBI-ProteinID: XP_041693827
LinkDB
Position
19:37245360..37282905
AA seq 1785 aa
MLIFQMAILLSAGACVLAQVPEFSDVCTEGSCYPATGDLLIGRAHQLSANSTCGLHRPEP
FCIVSHLQEEKKCFVCDSTDVYVKSVVNATTGHRVENVVTTFAPNRLKTWWQSENGLEKV
TIQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGQNWQVYRYFAYDCESAFPAISSGP
MQKVDDVICDSHYSDIEPSTEGEVIFRVLDPVFRIEDPYSPRIQNMLKITNLRVKFTKLH
TLGDNLLDSRMEIKEKYYYAVYDLVVRGNCFCYGHASECAPVDGAGDVVEGMVHGHCMCN
HNTMGLNCEKCQDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFDMAVYVSTGNGSGGV
CDECQHNTMGHNCEQCKPFYFQHPERDIRDPSICESCNCDPVGSLNGGICDRMTDVSSGL
ISGQCRCKPNVEGERCDQCKQAHYGLGDHPLGCLACTCNALGTVPGGNPCDTDSGDCYCK
RLVTRRDCDQCMPQHWGLSNDMDGCRPCDCDLGGAINNDCSQETGQCVCREHMFGRRCDQ
VESGFYFIALDHYTYEAEDAKFGPGVTVVQRPHPQDRSPTWTGVGFVNVPEGAYLEFSID
NIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPSVISADSRCANTMPDDDNQMISLHPGSR
YVVLPRPVCFEAGMNYTVRLSLPLYSALSDIQSPYTLIDSIVLMPHCKNLEIFTGSEGGN
LATNSAWDTFQRYRCLENSQSVVKTPSTDICRNFIFSVSALLHQGAKACQCDPQGSLSTV
CDASGGQCQCRPNVVGRNCDKCSPATYLFGPSGCRSCDCSPQGSEHAFCHEATGQCACVP
GAYGRQCDRCLPGHWGFPNCRPCTCNGHTEQCDPYSGECLDCREQTTGHNCERCLEGYYG
DPVLGSGDHCRPCMCPDGPGSGRQFAGGCYRGLDSHYQVFCICSPGYRGARCEECAPGYY
GNPHENGGQCQPCQCNNNIDMLDQESCDARTGECLKCLYHTEGQGCHSCKLGYYGDALTQ
NCRKCVCNHLGTNPATCPSVGDCHCDLGSGQCQCLPNVVGQHCDLCAPDTWNMASKRGCE
ACDCDPNHSFGTSCNELSGQCSCKPGFGGKTCRECRELFWGDPEVKCNACDCDPRGIAEQ
QCNKANGHCVCLEGVSGPRCDVCARGYSGTFPYCERCHQCFTDWDVIVGQLTNQTHRLVN
KVNTIKASGITGPYKHTIDNMEQSAGAIRTILAQNPATQPLSEIQQLLEQATDLMEEMSN
KLNLSEEALAQVSSDDNSTNTKLDSLKEDAQKLDRTVKELLDQVELIKNSDVRGATDSVT
KYYKQSLAAEAHANASTTGPGNPVESSFVLRQATEDKMNDTREEFHRRQEEHAKRLDDLA
DQLETLDLSELSEKTCGSPAGEVCADSLCGGLSCVDSDGNRRCGGEGCNGLVTLANNAWH
KAKDFDQEILMAMQEVDKLSKMVSEAKVKADEAKLSAQDVLLKTNKTKQRVAQSNEELRS
LIRQIRDFLTQDAADMESIEAVANEVLAMQMPSTPAQLQNLTDEIRERVGDLAQVETILN
QSADDVQRAESLLEQARRASKEATDVRETAEMVKQALEEAERAQKAAAEAIKQATTDING
TNDLLTSVESETADSEYKLNNTTQRLLRLEQDITLLREKTLNTSLSSEQTERDAETINKV
AEQVKKDLDSELKDKYSTVQDLIKQEAGGVADAKKRAELLQQEATDLLLQASDKLQLLKD
LEKSYEDNQKTLEDKANQLVDLEKAVKELLQEISHKVTVYSTCLF
NT seq 5358 nt   +upstreamnt  +downstreamnt
atgttgatatttcaaatggcgatcctgctatccgcaggggcgtgcgtccttgcccaggta
ccagagttcagcgatgtgtgcacggaggggagctgctaccccgccacgggagaccttctc
atcggcagagcccaccaactctccgccaactccacatgcggcctccaccggcccgagccg
ttctgtatcgtcagtcatttacaggaggagaagaaatgctttgtgtgtgactccaccgac
gtctatgtcaaaagtgtggtgaatgccaccaccggccaccgggtggagaatgtcgtgacc
acattcgcccccaaccgcctgaaaacctggtggcagtcagagaatggtcttgagaaagtg
accatccagctgaacttggaggcagagtttcatttcacccacctcatcatgaccttcaag
accttcaggcctgctgccatggtgattgagcggtcagctgactttgggcagaactggcag
gtgtaccgctactttgcctatgactgtgagtccgcattccctgccatatcctcggggccc
atgcagaaagtggatgatgtcatctgcgattcacattactccgacattgaaccatcgaca
gagggagaggtcatcttccgagttttggatccagttttccgtattgaagatccctacagc
cccagaatccaaaacatgttgaagatcaccaacctgagggtgaagttcaccaagctgcac
actctgggagacaacctgctggactcccgcatggagatcaaggagaagtactactatgct
gtctacgacttggtggtccggggtaactgcttctgctatggacacgcctcagagtgtgcg
cccgtcgacggggctggcgatgttgtcgagggcatggtccatggccactgtatgtgcaac
cacaacaccatggggctgaactgtgagaagtgtcaggacttctaccatgacctgccctgg
agaccagccgagggacgcaataccaacgcctgtaaaaaatgtaactgtaaccagcactca
gactcgtgtcacttcgacatggcagtatacgtctccacgggcaatgggagcggtggtgtg
tgtgatgagtgccagcacaacactatgggacacaactgtgaacagtgcaaacccttctac
ttccagcacccagagagggacatccgtgaccccagcatctgtgaatcgtgtaactgtgat
ccggtgggctctctgaatggcgggatctgtgacaggatgactgatgtgtcgtctggactg
atctctggccagtgtcgctgcaagcccaatgtggagggagagcgctgtgaccagtgcaaa
caggcccactacggcttgggagaccaccctctgggctgcctggcctgcacctgtaatgcc
ctggggacagttcctggagggaacccatgtgatacagactcgggagactgttactgcaaa
cgcctggtcaccaggagggactgtgaccagtgtatgcctcagcactgggggctaagcaat
gacatggatggctgcagaccatgtgactgtgacctaggtggagccatcaataatgattgt
tcccaggagactggtcagtgtgtgtgtcgagaacacatgtttggcaggcgctgtgaccag
gtggagtcaggcttctacttcatcgccctggaccactacacctacgaggcagaggacgcc
aaatttggacctggtgtgacagtagttcagagaccccaccctcaggaccgtagccccacc
tggacaggggtaggtttcgtcaatgttcccgagggggcctacctggagttctccatcgac
aacatcccccactccatggagtacgacatcctcatccgctacgagcctcagttaccagac
cagtgggaggaggtgttgatgacagtgatgcggcccagtgtgatctcagcagacagtcgc
tgtgccaataccatgcctgacgacgacaaccagatgatatccctccaccccggatcacga
tatgtggtgctccccagaccagtgtgtttcgaggcagggatgaactacacagttcgtctg
agtctgcccctctactctgcactcagcgacatccagtccccatatacactcattgactcg
attgtgctgatgccccactgtaagaacctggagatcttcactggttctgagggcggtaac
ttggccaccaacagtgcctgggacaccttccagcgctaccgctgtctagagaacagccag
agcgtagtgaagaccccctccacagacatctgccgcaactttatcttcagcgtatccgct
ctgctgcaccagggagctaaagcatgccagtgtgacccgcagggctctctcagcacagtg
tgtgacgccagcggcgggcaatgccagtgtcgtcccaacgtggtaggcaggaactgtgac
aagtgttcccctgccacctacctgtttggacccagtggctgcagatcctgtgattgcagt
ccccagggatcggagcatgcgttctgccatgaggctacaggccagtgtgcttgtgtcccc
ggggcgtacggccgtcagtgtgaccgctgtctgccgggtcactggggcttccccaactgt
cgcccctgcacctgcaatggccacacagagcagtgtgacccctactccggagaatgcctg
gactgccgagaacagaccaccggacacaactgcgagaggtgtctggaaggttactatggt
gaccctgtcctgggttcaggggaccactgtcgtccctgtatgtgtccggatgggcccggt
agcgggcggcagtttgccggtggatgttaccgcggtctggactctcactaccaggtgttt
tgtatctgcagccctgggtacagaggtgccagatgtgaggagtgtgccccaggttactat
ggaaacccccatgagaacggcgggcaatgccaaccgtgccagtgcaacaacaacattgac
atgctggaccaggagtcctgtgatgccaggacgggtgaatgtctcaaatgtctctaccac
accgagggtcaaggctgccacagctgcaagctgggttactatggggatgccctcacacaa
aattgcagaaagtgtgtgtgtaaccacctgggcaccaacccagccacatgcccgtcggtg
ggcgactgccactgtgatctgggcagtgggcagtgccagtgtctaccgaacgtggtgggt
cagcactgtgacctgtgtgcccccgacacctggaacatggccagcaagaggggctgcgaa
gcctgcgactgtgaccccaaccactcatttggaacatcctgcaacgagctgagtggccag
tgctcctgtaaacctggctttgggggtaaaacgtgtcgggagtgcagagagctgttctgg
ggagaccctgaagtcaaatgcaacgcgtgcgactgtgacccacgaggcatcgccgagcag
cagtgcaacaaggccaacggtcactgcgtgtgcttggagggcgtgtctggtccccgctgt
gacgtctgcgcccgcggctactctggcaccttcccctactgtgaacgctgccaccagtgc
ttcaccgactgggacgtgatcgtgggtcagctgaccaaccagacccacaggctggtcaac
aaggtgaacaccatcaaggccagcggcatcaccggaccctacaaacacaccatagataac
atggagcagagcgccggggccataagaactatcctggcccagaacccggctacacagcca
ctgtctgagatacagcagctactggagcaggccacagatctaatggaagagatgagcaac
aagctgaacctctctgaggaggcgttggcccaggtatcatctgatgacaacagcaccaac
accaaactggactctctcaaagaggacgcccagaaactggatcgcaccgtcaaggagctg
ctggaccaagtggagctcatcaagaactctgatgttcggggagcgacagacagtgtcaca
aagtactacaagcagtctctggctgctgaggctcacgccaatgcctccaccaccggccca
ggcaaccctgtggagagctctttcgttctacgacaagctacagaggacaagatgaatgac
accagggaggagttccacaggaggcaggaagaacacgccaagagactggacgacctggcg
gatcagctggagacattggacctatcagaactcagcgagaagacgtgtggtagcccagct
ggtgaggtgtgtgcagactctctgtgcggggggctgagctgtgtggactctgacgggaac
aggaggtgtgggggtgaggggtgcaacggtctggtcaccctggccaacaatgcctggcat
aaggccaaggactttgaccaggagatcctcatggccatgcaggaggtggacaagctctcc
aagatggtgtcggaggccaaggtgaaggcagacgaggccaagctgagtgcccaggacgtg
ctgctgaagacaaacaagaccaagcagcgcgtggcccagagcaatgaggagctgcgcagc
ctcatccgacagatcagagacttcctcacacaggatgcagcggacatggagagcatcgag
gcagttgccaacgaggtgctggccatgcagatgcccagcacgccagcccagctccagaat
ctgacagacgagatcagggagagggtgggagacctggcccaagtggagactatcctgaac
cagagcgccgacgatgtgcagagagccgagagcctactggagcaggcacgcagagccagt
aaagaggcaacagatgtgagggaaacagcagagatggtgaagcaggctctggaagaggct
gagcgtgcccagaaagcagcggccgaggccatcaaacaggccaccaccgacatcaatggc
accaatgacctcctgacctcagtggagtcggagacagcggactcagagtacaagctgaac
aacaccacccagaggctgctccggttagagcaagacatcacactgctcagagagaagaca
ctgaacacctcgcttagctctgaacaaaccgagagagacgcagagaccatcaacaaagtg
gctgagcaggtcaaaaaggacctggactcggagctgaaggataagtacagcactgtgcag
gacctgatcaaacaggaggccgggggcgtggccgacgccaagaagagggcggagcttcta
cagcaggaagccacagacctgctgctacaggccagcgacaagctgcagctactgaaagat
ttagagaagtcctacgaggacaaccagaagactctggaagacaaggccaaccagttggtg
gatctggagaaggctgtcaaagagctgctgcaggagatcagtcacaaagtcactgtgtac
agcacctgtctgttttaa

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