Coregonus clupeaformis (lake whitefish): 121532150
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Entry
121532150 CDS
T08357
Name
(RefSeq) leucine-rich repeat neuronal protein 3-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121532150
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121532150
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
Ig_3
I-set
ig
fn3
Ig_2
Fn3_ELFN
LRRNT
C2-set_3
LRR_RPS2
LRRCT
Motif
Other DBs
NCBI-GeneID:
121532150
NCBI-ProteinID:
XP_041693833
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All DBs
Position
19:complement(37557070..37570717)
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AA seq
696 aa
AA seq
DB search
MKKSAFLACLLAELALTAFVLASEGGAAHCPALCRCEIRPWFSPSSIYTEAPTVDCNDLG
LSTLPERLPSDTQVLLLQTNNIISVENPLDYLANITEIDLSQNNISSVRDVHLGPLPQLL
SLHMEENWVQALSDSCLPSLPNLQEFYINHNLISSISPGAFRGLGRLLRLHLNSNHLRGI
SRVWFQPLPRLEILMIGENPIVQLSDMNFKPLVNLRSLVLARMNLSEIPDDTLVGLDNLE
SVSFFDNLFDRVPQAALKKAKSLKFLDLNKNPIERIQRGDFVDMFHLKELGINSMPALVS
IDSFALSNLPELTKIEATNNPKLSYIHPNAFHKLPRLETLMLNSNALSALHHNTVDSLPN
LREVSMHSNPIRCDCVIRWINMNQTGVRFMEPDSLFCVEPPEFQGQHVHQVHFREMTEIC
LPLISPGSLPDQVTVGKRSSVTLHCRAFGEPEPEIYWVTPSGDRVLPNSVSDKYYMHPEG
TFDIYDTTVLEAGLYTCVAHNLVGADLKSVLVVVDGYFPHPSDTGNALHVDVRSVQPNSV
SVSWDNTHGGLISNIKWFTVANAKHPSMAYTARVPTDVKMYCLTHLNPSTQYRVCVEVTS
MQLGHNRDCVNVTTKGLAHPVESSEKWDTVVMAACAVLFIVVAVACSIIYTSLQSQQFYR
KLMVDQSESLLGPLTELCVAGVKVRATVIDLPDNSM
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagagcgcgttcttggcttgtttgttagcggagctagctctgactgcctttgtt
ctggcctcagaggggggcgctgctcattgccctgcattgtgtcggtgtgagatacgaccc
tggttctctccaagctctatttataccgaggctcccacggtggactgtaatgacttaggc
ctatcgacactgccggagagactgccctcagacacacaggtgctattgttacagaccaac
aatatcatcagcgttgagaatcctttggattacctggctaatatcacagagatagattta
tcccagaataacatatcctctgtgagggatgtccatctgggtcctcttccccagctgctg
tcactacacatggaggagaactgggttcaggccctgtcagacagctgtctaccatccctg
cccaacctccaggagttctacattaaccacaacctgatctcatccatcagtcctggtgcc
tttagagggctggggaggctactgcggctccatctcaactccaatcacctcaggggcatc
agcagggtgtggtttcagcctctgccccgcctggagatcctgatgatcggggaaaacccc
atcgtccaattgtcagacatgaacttcaagcccctggtcaacctacgcagcttggttctg
gccaggatgaatctgtccgaaatcccagatgacactctggtcggcctcgacaacctggag
agtgtctcgtttttcgacaacctgtttgacagagtcccccaggctgctctgaagaaagcc
aagagcctgaagtttctggatctcaacaagaaccccatcgagaggattcagagaggggac
tttgtggacatgttccacctcaaagagttgggcatcaacagcatgcctgcgctggtgtcc
atcgacagcttcgccctcagcaatctccctgagctgaccaagatcgaggccaccaacaac
cccaagctctcctacatccatccaaacgccttccacaagttgccgagactcgagacactg
atgctgaacagcaatgctctcagcgccctgcaccacaacaccgtagactccctgcccaac
ctgcgtgaggtcagtatgcacagcaaccccatccgctgtgactgcgtcatccgctggatc
aacatgaaccagaccggcgtgcgcttcatggagccagattccctcttctgcgtggagccg
ccggagttccagggccagcacgtccaccaggtccacttcagggagatgaccgagatttgc
ctcccgctcatctcgcccgggagcctcccagatcaggtcaccgttgggaaaaggagctcg
gtgacgcttcactgccgggcatttggagagccggagccagagatctactgggttaccccc
tccggggacagagtcctgcccaacagtgtgtctgataagtactacatgcatcccgagggg
acctttgacatctatgacactaccgtgcttgaggcagggctgtacacctgcgtcgctcac
aatcttgttggtgcagacctcaagtctgtgttggtggtggtagatggatactttccacat
ccttctgatactggtaatgctttacatgtggacgttagatcagtgcagcccaactctgtt
tcagtgtcttgggataatactcatggtggtcttatatccaatataaagtggttcacagtg
gcgaatgctaagcacccctccatggcatacactgctagagtaccaactgatgtgaagatg
tattgtctcactcatctgaacccctccacccaataccgggtgtgtgtggaagtcacgagc
atgcagctcggacacaacagggactgtgtcaatgtcaccacaaagggactggctcacccc
gtagagagcagtgagaagtgggacacagtggtgatggctgcatgtgctgtgcttttcatc
gtggtcgctgtggcttgctccatcatatacacgtctctgcaaagccaacagttttacagg
aagttgatggtggaccaatccgagtcattgctgggtcctctcacagaactctgtgtggct
ggagtcaaggtgagagcgaccgtaatagacttgccagacaactccatgtaa
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