Coregonus clupeaformis (lake whitefish): 121532162
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Entry
121532162 CDS
T08357
Symbol
sall1b
Name
(RefSeq) sal-like protein 1
KO
K19871
sal-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121532162 (sall1b)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121532162 (sall1b)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121532162 (sall1b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121532162 (sall1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2H2_2
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
121532162
NCBI-ProteinID:
XP_041693852
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All DBs
Position
19:complement(38095020..38099567)
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AA seq
1215 aa
AA seq
DB search
MFPLASSPSKPGEPGKTVNNSEMEEFSDLSEEKSEVKEESMDVSRSKNSHGWLDSPSSTS
CSRKSSTDSMTDIVSCTSVLPISLTQPGNDLSEQQGTFSWFNSNVIIENLESTKVAVAQF
SQQSRSDTGSSGSSKMAVSSLMEQLLALQLHQIHQLQLIDQIRHQVLSFASQRSEVSETL
TPISCPQVSLASTHASQLTTLSSHLSQQLAAATGLAQSLGSQSASIGHFKQLTATVQLPQ
STLGRSIVHSSTEPLQSMGKLIASAVSKHHSRKKYTHASGLYPQLNVSAQTKRNSPVLGS
GSSLNPSNKPRLPQPPPSNQTLSSAEPSIGTIVQDLNALTALAKQRKGKPPNVTYFEPKS
SSEEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPYKCNICGIRFSTRGNLKVHFQRHK
ERFTHIQMNPYPVPEHLDNIPTSTGIPYGMSMPPEKPVTCWVDSKPSLATLTTSVGLLLQ
TGSPNLPFLIKKEEQPVSITAYSSPGIRESSSEVKSTKSIDLVEAGKVPTFPTMNLKTDD
VKPPLTFVSKMSSTTEISADVASISTNPIKLEQFKTKHPFRGGSIDPLQTSETLKLQQLV
ENIDKKVTDPNECVICNRILSCQSALKMHYRTHTGERPFRCKVCGRAFSTKGNLKTHHAV
HRTMPPLWVYHSCPICQRKFTNAVVLQQHIRMHMGGQIPNTPLSEQNYPKSIESGGGSID
DRKLEELENPSDDDMDFNDSGIAGMSRFNNASSGSLSPAPSDSTGAGSSDAQMTRNYHRQ
VEEKQVNWFKTKGLAKEDQQVYDSSSLRGDRSGGSLAVSENTVDKQSLSPSKSVPVRSSP
TSFEELYQKALSQAHINPSLLQFTGTSPLASLDHLKSLNPLKDPTNMVYSFCEQLGIFKN
NDCDICGKNFACQSALDIHYRSHTRERPFICTACNRGFSTKGNLKQHMLTHQMRDLPSQL
FEPFTPSLASSPNNSIHPLGSQMIKTEVNSFLGSARYGEPRDLLGILSLRTSSASSSPAL
VIPPPRRTPKQHYCHSCGKTFSSSSALQIHERTHTGEKPFACTVCGRAFTTKGNLKVHMG
THMWSSAPTRRGRRLSVDGPLMFMGTHPVKLQEPPQRPDIRSSNGDSFCFWNHCTDSFSK
NLAMRNKDISVGSYLSGPMEHGASSPIGGVNVGLDKLHHTEHNAALELPGKNDTKRATHF
CFPHLIEERMEMIAN
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgttccctctagcctcgtcgcccagtaaaccaggggaaccaggcaaaacagtcaacaac
tctgaaatggaagagttcagtgatctgtcggaggagaaatcggaggtgaaggaagaatcc
atggatgtttccagaagtaagaatagccacggctggctagatagccccagtagcaccagt
tgcagccggaaaagcagtactgacagcatgactgacattgtttcatgtacctcagttctc
ccaatttcactaactcaacctggcaacgacctgtcggaacagcaggggacattctcatgg
ttcaacagcaatgtcatcattgaaaacctagagagcactaaagtggccgtggcccagttt
tcccagcagagccgatcggacaccggcagcagtggcagcagtaagatggccgtctcatca
ctgatggagcaactcctggccttgcagctgcaccagatccaccagctgcagctgattgat
cagattcgtcaccaggtcttatcgtttgcctcccagaggtctgaggtatcagagacactg
acacccatcagctgccctcaggttagtctagcatcaacgcatgccagccagctgacaacc
ctcagttcccatctctcccagcagctggctgcagccactgggttagcccagagtctcggc
agccagtctgccagcattggccactttaaacaattaacagcaacagtacagttaccacag
agcaccctaggtaggagtattgtgcactctagcactgaacccttacaaagcatgggtaaa
ctcatagcttcagcagttagcaagcaccactctagaaagaagtacactcatgctagcggt
ctataccctcaactaaatgtttcagctcaaaccaaaaggaactcaccggtacttggctca
ggtagctcgctaaacccatcaaataaaccacgtctacctcagccaccacccagcaatcaa
acactctctagcgctgaaccaagcattggcacaattgtgcaagacctgaatgccttgacg
gcgttagccaaacaaaggaaaggaaaaccacccaatgtgacttatttcgaacccaaaagc
tcttccgaagaggctttctttaaacacaaatgcaggttttgtgctaaggtttttgggagt
gacagtgccttgcagatccatttgcgatcccacactggggagaggccatacaagtgcaac
atctgcgggattcgtttctccacccgtgggaacttgaaggtacacttccagcggcacaaa
gagaggttcacccatatccaaatgaacccttaccctgttccagaacacctggacaatatc
ccaaccagcacaggaatcccatatggcatgtctatgccaccagagaaaccagttacatgc
tgggtggatagtaaaccatccctagccaccttgactacttctgtaggcctgttgctccaa
actggatcacccaacttaccctttctcatcaagaaagaggagcagcctgtctcaataact
gcgtattccagtccaggtatacgtgaatcatctagtgaagtaaagtctaccaagagcata
gacttggtagaggctggaaaagtcccaaccttccccaccatgaatctgaaaacagatgac
gttaaacctcctttgacctttgtttcgaagatgagctccacaaccgaaatatccgccgac
gtcgcttccatcagcacaaatcccatcaagttggagcagttcaagaccaaacatcccttc
agaggaggatcaattgatcccctgcagacatcagagaccttgaaactccagcagctggtt
gagaacattgacaagaaggtgactgaccccaacgagtgcgtcatttgcaaccgcatactt
agttgtcagagcgccctcaagatgcactaccgcacccacacaggagagcggcccttcaga
tgtaaagtgtgcggacgggcgttctccaccaaagggaacctgaagacgcaccatgcggtt
catcgcaccatgccgccactgtgggtctaccactcctgtcctatctgccagaggaagttc
actaacgctgttgtcctacagcagcacatccgtatgcatatgggtggtcagattcccaac
acccctctctctgaacagaactacccaaagtcaatagagtctggcggaggttcaattgat
gataggaaattagaagagttggagaacccttctgatgatgatatggacttcaatgacagt
gggatcgcaggcatgtccaggtttaataacgcctcatccggcagcttgtctcccgctcct
tctgatagtacaggagcaggctcctctgatgcccagatgacaagaaactatcataggcaa
gtggaggagaagcaggtcaactggtttaagacaaagggactggctaaagaggatcagcag
gtctatgactcatcatctcttagaggtgaccgaagtggtgggagccttgctgtttctgag
aatacagttgacaagcagtctctgtccccaagcaagagtgttccagttcgttctagcccc
acaagctttgaggaattgtaccagaaagctttatcccaggcacatatcaatccaagcctt
ctgcagttcactggcactagtccactggcgtcccttgaccacctaaaatctttaaaccca
ctgaaggatcccactaacatggtctactctttctgtgaacaactaggcatcttcaagaac
aatgattgcgatatttgcggtaagaactttgcctgccaaagtgccttggacatccattat
cgaagccataccagggagagaccatttatttgtacagcgtgcaacagagggttttccacc
aaggggaacctcaagcagcatatgctaacccatcagatgagggacctgccatcccagttg
tttgagcccttcactcccagccttgcctccagccccaacaactccatacatcctctgggg
tcccaaatgatcaagacagaagtgaacagtttcctgggtagtgcccgctatggggaacca
agggatcttctaggcattttgagtttgaggacgtcctctgcctcttcctccccagcactc
gtcatcccgccacctcgacggactcccaagcagcattactgccactcttgtgggaaaacc
ttctcttcctctagtgccctgcaaatccacgagaggactcacaccggggagaagccgttc
gcctgcactgtctgtggtcgggcattcaccaccaaaggaaatctgaaggtccatatggga
actcacatgtggagtagcgcccccaccaggcgaggacgcaggctgtctgtggacggacca
ttgatgtttatgggaactcatcctgtgaagctacaagagcctcctcagaggccagacatt
aggtccagtaatggagactccttttgtttctggaaccactgtacagactccttctctaag
aacttggccatgaggaataaagatatctcagtcggatcttacctctctggaccaatggag
catggggccagctcacccatagggggcgtaaatgttggtctggacaaattgcaccataca
gaacacaatgctgctctcgagctgcctggtaaaaatgataccaaaagagcaactcacttc
tgtttccctcatttgatagaagagaggatggaaatgattgcaaattaa
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integrated database retrieval system
