KEGG   Coregonus clupeaformis (lake whitefish): 121532169
Entry
121532169         CDS       T08357                                 
Symbol
lsm14aa
Name
(RefSeq) LSM14A mRNA processing body assembly factor a isoform X1
  KO
K18749  protein LSM14
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cclu03019]
    121532169 (lsm14aa)
Messenger RNA biogenesis [BR:cclu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     121532169 (lsm14aa)
SSDB
Motif
Pfam: LSM14 SM-ATX FDF
Other DBs
NCBI-GeneID: 121532169
NCBI-ProteinID: XP_041693863
LinkDB
Position
19:complement(38227639..38244613)
AA seq 544 aa
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE
IFEYIIFRGSDIKDLTVCEPPKPTCSLPQDPAIVQSSMGSAPPPAAAASAPFQSVGSYGL
FNRAPVPPYSQFSTSPLVSPQFGAVGVGKSHSSTRSGYGRSVPSSFGSDTSSAAPQSQSS
AIGAALPTDSRSLGTATTLVSKVRTSPSLDPLRKSPTLEQAVQAGPSAPSAPAPGLGRRS
PAPGRTAPSAAATGHVHQKAQQQHHIQDGGDPRRTGETVSGARSNQAWPAPRNAPISHQH
HTTAVDRASTAGLMHSIFSASAGGPPPQRRGRGGGHRGRGHFNVRRDGPMKFEKDFDFES
ANAQFNKEEIDREFQSKLKLKDEKTEKPEKAAANGEDKGDSGVETVNSEGNADEEGGEAL
TPNVYYDKSKSFFDNISCDDSRKAAERSGGGSGFPRERRQTWAEERRMNSETFGIPLRGG
RGRGGYRGRGGIGFRGGRGRSASRGSFGPPQGGHGYRGGYNRTSQGGREFSENFEYRKDN
KVAA
NT seq 1635 nt   +upstreamnt  +downstreamnt
atgagtggaggaaccccttatatcgggagcaaaatcagcctaatatcgaaggccgagatt
cgttacgaagggattctctacactattgatactgagaattcgactgtcgcacttgcaaaa
gttcgctcttttggcactgaggatcggcccactgataggcccatccctccccgagatgag
atctttgagtacatcatcttcagaggcagtgacatcaaggacctgactgtatgtgagccg
cctaagccaacatgctctctccctcaggacccggccatcgtccagtcgtccatgggctcg
gcccctccacctgctgctgctgcttcagcgccattccagtcggtgggctcctacggcctg
ttcaaccgagccccggtgcccccgtacagccagttcagcaccagccccctggtgtccccg
cagtttggcgccgttggtgtcggtaagagccacagcagcacgaggtctggatatggaaga
tcagtcccctcctcctttgggagtgacacaagctcagctgcaccccagtctcagagcagt
gctattggcgctgctctccccactgattcacgctctctgggtaccgctactacccttgta
tctaaagtccgcactagcccctctctggaccctctgaggaagagccccaccctagagcag
gctgtccaggccggcccgtcggccccctccgccccagcccctggcttgggccgcaggagt
ccagctcccggccgcacggccccctcggctgcagccaccggccatgtccaccagaaggcc
cagcagcagcaccatatccaggacggaggtgaccccaggaggaccggtgagactgtcagt
ggggcccgcagtaaccaggcctggcctgcgccccgcaacgcaccgatctctcatcaacac
cacaccactgctgtagatagggcttccactgcagggcttatgcactctatctttagtgcc
tcagctggcggccccccacctcagaggcgtggtcgtgggggcggacaccgcggcaggggc
cacttcaacgtgcgccgagacgggccaatgaagttcgagaaggactttgactttgagagc
gccaacgcccagttcaacaaggaggagattgacagggagttccagagcaagctcaaactg
aaagatgagaagactgagaagccggagaaggcagcggcgaacggggaggataagggcgac
tccggggtggagacagtgaatagcgagggcaacgctgatgaagaagggggagaggcacta
acgcctaacgtttactatgacaagtccaagtctttcttcgacaacatctcctgtgatgac
agcagaaaagctgcagaaagatctggaggaggctctggtttcccacgggagcggaggcag
acctgggccgaggagaggcggatgaactctgagacgttcggcattcccctgcgtgggggt
cggggccgtgggggctaccgtgggcggggcggcataggcttccgcgggggcaggggacgc
tcggccagcagagggtccttcggccccccccaaggaggccacggctacaggggaggatac
aaccgaacaagccagggaggacgggagttctcggagaactttgagtacaggaaggataac
aaggtggctgcgtag

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