Coregonus clupeaformis (lake whitefish): 121532183
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Entry
121532183 CDS
T08357
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121532183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121532183
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Others
Others
121532183
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121532183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
Rod_CreS
RBD-FIP
CCDC18_1st
CCDC192
AAA_13
DUF5798
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
121532183
NCBI-ProteinID:
XP_041693886
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Position
19
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AA seq
1122 aa
AA seq
DB search
MYGSARSVGRADANHSGGGRDGGRDTGRDGGRSQGSCRSPHLPRSPRMGHRRTNSTGGSG
GGPGGAGGKTLSMENIQSLNAAYATSGPMYLSNNEVAMSDHVNKSGREMTTMGRQRVTYG
SRASAGGGGGVAASTPNIATSAQANAVLPGGMMAGDALAFGDHHMASTVPHSLRQARDNT
ILDLQAQLKEVLRENELLRREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITV
WKEQYRVVQDETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRDLALTSEPTEENYRR
LYGDHERQAKELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKASEED
QERTRRLADAEMHRHHLESLLDQRDRETTALREELHRRYEGTPESTKTKALQTVIDMKDA
KINSLERGLRDMEEEVMMLKSNGLLSCEERQEEIKQMEVYRSHTKFMKNKMDQVKQDLSR
KDTELLGLQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETT
LNKKSKQIQEMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSL
KERVKSLQADTSNTDTALTTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDL
KEKVSLLQGDLSDRETNLLDLKEHASSLASSGLKKDSKLKSMEISLEQRKEACLKLENQL
KRAQNATFEAKANTELSERITSLEREVTRHREDSGKAQAEVDRLLEILREMENEKNDKDR
KINELESQSSRQTKDQSKKVASLKHKEQVEKSRNAQLKNEAKKREDNISESSQQVKDSLR
LKTERIEELEEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRA
KLSSTQQSLCEKEAHLTTLRVERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKK
KTQDEVALLKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTNHKPSPDQMIPPL
LSLSENRSKLKLYIDHLTDLCHDRDPSILSDLTPPLHYHHTNPPAWEEELHKLTLEQLEL
ELELCEKESGELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagcgcccgttctgtgggcagagcggatgccaaccacagcggaggaggaaga
gatggaggaagagacacagggagggatggggggagaagccagggttcatgtcgctcccct
catctcccacgctccccacggatgggccaccgtcgcaccaacagcacggggggcagtgga
gggggtccaggcggagcagggggtaagaccctctccatggagaacatccagtccctcaat
gccgcctatgccacctcaggacccatgtacctgagcaacaacgaggttgccatgtccgac
cacgttaacaagagtggtcgagagatgactacaatggggcggcagagggtgacatacggg
tcaagggcaagtgcaggagggggtggaggggtggcagctagcacccccaacatcgccaca
tcggcccaggccaatgctgtactccctggggggatgatggcaggcgatgccctggctttt
ggggatcaccacatggcctccacggtccctcactccctgagacaggcccgggacaacacc
atactggacctgcaggcccaactcaaagaggttctgcgtgagaacgagttgctgcgtcgt
gaggtggaggtgaaggagagcaagctgagttcctccatgaactccatcaagaccttctgg
agccctgagctgaagaaggagagagcactaaggaaggacgaggtgtccaagatcactgtc
tggaaggaacagtaccgcgtggtgcaggatgagacacagcacctccatatgacggtccag
gccttgcaggatgaactgaggatacagagagacctgaaccagctgctccagcaggaccct
gccagccaaggtcgcgacctggccctgacctctgaacccacggaggagaactaccgtcgg
ctatacggggaccacgagcgtcaggccaaggagctgttcctactcaggaagaccctggag
gagatggagctgaggatagacacccagaaacagaccctgggtgccagggacgagtccatc
aagaaactactggaaatgctgcagagcaaagggccgtcggctaaggcgtcagaggaagac
caggagagaaccaggagactggctgatgctgagatgcacagacaccatctagagtcccta
ctggaccagagagacagggagacaactgctctacgagaggagctgcaccgtcgatacgag
ggaaccccagagtccacaaaaaccaaggctctacagaccgtcatcgacatgaaggatgct
aagatcaactcactggagcgaggtctgagggacatggaggaggaggtgatgatgttgaag
tccaacggcctgctgagctgtgaggagagacaggaggagattaaacagatggaagtctac
cgcagccacaccaagttcatgaagaacaagatggaccaggtgaagcaggacttgtccagg
aaggacacagagctgctgggtttgcagaccaagctggagactctgaccaaccagttctct
gatagcaagcagcacatcgaggtcctcaaggagtctctgactgctaaagaacaacgagct
gccatcctacagacagaggtggatgcattgcgtctgcgtctggaggagaaggagaccact
ctgaacaagaagagtaaacagatccaggagatgtctgaggagaagggcacgctcaacgga
gagatccacgacctcaaggacatgctggaggtcaaggagcgaaaggtcaacgtcctgcag
aagaagattgagaacctgcaggagcagctgagagacaaggagaagcaaatgagcagcctg
aaggagagagtcaagtctttacaggcagacacctctaacacagacactgctctcaccaca
ctggaggagtcccttgctgagaaggagcgtatcattgagcgtctgaaggagcagagagac
agagacgacagggagaagactgaggagatcgacagcaacaagaaagaactgaaggatctg
aaggagaaagtcagtctgctgcagggagatctgtccgacagagagactaacctgttggac
ctgaaggagcatgcgtcgtccctggcctcctcagggctgaagaaagactccaagctgaag
agtatggagatctctctggagcagaggaaggaggcgtgtctcaaactggagaaccagctc
aagagggcacagaatgcgacgttcgaggccaaggcgaacacggagctgtcggagcgcatc
acctccctggagcgggaagttacccgacaccgagaggattctgggaaggctcaggcggag
gtggaccggctgctggagatcctgagagagatggagaacgagaagaatgacaaggaccgc
aagatcaacgagctggagagtcagtcctccagacagaccaaggaccagagtaagaaggtg
gcgtctctgaaacataaggagcaggtggagaagagtaggaacgcccaactgaagaacgaa
gccaaaaagagagaggacaacatctcagagagctctcaacaggtcaaggactctctgcgg
ttgaagacggagcgtatcgaggagttagaggaggctctgagagagagtgttcagatcaca
gcagagagagagatggtgctggcacaggaggaggctgccaggaaccaccaggagaaacag
attgaggagctgctgggggccatggagaaggtgaaacaggagctggagtccatgagggcc
aagctgtcgtctacccagcagtccctgtgtgagaaggaggcccacctgaccacgctgagg
gttgaacgcaggaaacacctggaggaggtgctggagatgaaacaggaggcgctgctggca
gccatcagtgagaaggacgccaacatcgccctgctggagctgtcctcgtccaagaagaag
aagacccaggatgaggtggctctgctgaagagagagaaggaccgtctggtacaacagctc
aaacagcagactcagaaccgtatgaagctaatggcagacaactatgaggacgaccacctg
aagaccgcccccgaccagaccaatcacaaaccttctccagatcagatgatcccacctctc
ctgtccctgagtgaaaatcgcagtaagctgaagctctacatcgaccacctgactgacctc
tgccacgaccgagaccccagcatcctcagtgacctgaccccgcccctccactatcaccac
accaacccaccagcctgggaggaggagctacacaagttgactctggagcagttggaactg
gagttggagttgtgtgaaaaggagagcggggagctgcaggagtatgccaactcagtgctg
cagcagatcgctgactactgccctgacatcctggagcaggtggtcaatgcgctggaggag
tcctgctga
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