Coregonus clupeaformis (lake whitefish): 121532215
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Entry
121532215 CDS
T08357
Name
(RefSeq) RNA-binding motif protein, X chromosome isoform X1
KO
K12885
heterogeneous nuclear ribonucleoprotein G
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121532215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121532215
Spliceosome [BR:
cclu03041
]
Common components
Common spliceosomal components
hnRNP proteins
121532215
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM1CTR
RRM_7
Nup35_RRM_2
PHM7_cyt
RBD_DEAH11
RRM_PARP14_3
RRM_5
DUF7373
Motif
Other DBs
NCBI-GeneID:
121532215
NCBI-ProteinID:
XP_041693954
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All DBs
Position
2:25940424..25945598
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AA seq
383 aa
AA seq
DB search
MAEADRPGKLFIGGLDTETDEKALEKYFSKYGRIVEVLLMKDRETNKSRGFAFVTFESPA
DAKDAAREMNGKSLDGKPIKVEQATKPTFGRGPPPMHPRSRGPPRGPRGSRGAPSGMRGP
PSRDYYDNIGIVEPFFKGISSRGPPPLKRGPPIRNGGPPPKRHAPSPMGRPPMSRDRDPY
GPPPPRRDSMSRRDDYPSPRDEYYSTKDSYSSREYTSSRDTRDYAPPPRDYPQSSSRDEY
GSMSRGYSERDGYGGGREPKSYMERPSAAAYREPYGGYGNSRSAPPSRAPQPSYNGSGGS
SRYDDYGSSSRDGYGSRESYPSSRSDPYPPSRGERMGRQERGPAPPIERGYPPRDAYSGS
SRGAPRGGRGGSRVDRGIARSRY
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccgaccgaccagggaagctcttcatcggaggcctggacactgaaactgac
gaaaaggcccttgagaagtatttcagcaaatatggcagaatagtagaagttctgttgatg
aaagatcgggaaacaaataaatcaagaggttttgcttttgtgacctttgagagtccggca
gatgcaaaggatgctgcgcgtgaaatgaatgggaagtcgcttgatggtaagccaatcaag
gttgaacaagctacgaaacctacgtttggacgcggcccaccacccatgcatccacgcagc
cgtggtccccctagaggccctcgaggatctagaggagcaccaagcggaatgaggggtcca
ccatccagagactactatgataacatagggattgtagaaccctttttcaaagggatttca
tccagaggacccccaccactgaagagaggacctccgattcgtaatggaggccccccaccc
aagagacacgctccttctcctatgggtagacctcccatgtccagggacagggacccctac
ggcccaccccctccccgcagagattcgatgtccagaagggatgattacccatcaccaagg
gatgaatattacagcacaaaggacagctattctagccgggaatatacaagttccagggat
acaagggactatgcaccaccaccaagggattatccccaatccagttcccgcgatgagtat
gggtcaatgtccaggggctacagtgagcgtgatggttatggtggaggccgggaacctaaa
agctatatggagcgccctagtgcagccgcctatcgagagccctatggtggttacggtaac
tcacgcagcgccccaccctcaagggccccccaaccatcctacaatggcagtggcggaagc
agtcgctatgacgactatggcagcagttcccgggatggctatggcagtcgtgaaagttac
cccagcagtcggagtgacccatacccccctagccgtggtgagcgaatgggcaggcaggag
cgggggccagcacccccaatcgagagaggctaccctcctcgtgacgcgtacagtggctca
agtcgcggggcgccccgtggtggccgcggaggctcaagagtcgatagaggaattgcccgc
agcagatactga
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integrated database retrieval system
