Coregonus clupeaformis (lake whitefish): 121532234
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Entry
121532234 CDS
T08357
Name
(RefSeq) rho guanine nucleotide exchange factor 6 isoform X1
KO
K05729
Rho guanine nucleotide exchange factor 6
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04518
Integrin signaling
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04518 Integrin signaling
121532234
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121532234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121532234
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121532234
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Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
SH3_1
SH3_9
CH
RhoGEF67_u1
PH
CENP-Q
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
121532234
NCBI-ProteinID:
XP_041693993
LinkDB
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Position
2
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AA seq
774 aa
AA seq
DB search
MNPEEQTVTWLISLGVLNSPKKNIADPEEFLKISLKDGVVLCKLMERLVPGSIPKYCQDP
RNEADCIANINEFLRGCTSLKVEGFEPECLYTGENFNKVLTTLLGVNFATQDCGTERSCP
HSGTPAPSQSTTSHTHATSRSKSLRRQSKPAEMSENGGGGLVLVKARFQFKQNNEDELSF
NKGDLISVLRQEEGGWWEGSLNGKTGWFPSNYVREVKPCDKPVSPKATQLTKSYYSVVVQ
DILEHEREFVKELQTVLSCYLRPLKASDKLSITDSGSLSGNLEEILTFQQGLVLALDECT
KVPESQQRLAACYLNLIGQIRTLYRSYCSSHPSAVCVLTDHSEELGMFMESQGASTPGIL
TLTTSLSKPFMRLDKYPILLQELERHMEEAHPDYSDIMKVTVAFKSLVTQCQDLRKRKNL
ELQILSEPVRGWEGDGMKSLGHVAYMSQVHMQNGTNEEKEERYLMMFPSVLVMLSASPRM
SGFIYQGRLPLTGSTVSRQMADTENGHYTFEITGSTMDRVTVFCSNPQELQEWLDHLHAY
TEGASPVGPIIKNELGKPVSMVGTPTHQSHLPSFSTPSQANRGPLEPPKTTKPWSLSCLR
PAPPLKPSAALCYKERMSYILKDSSKSPGPIKKFLPKRRAERKHSDDEFLLRKSTAALEE
DAQILKVIEAYCTGASQHQTNTAVRKESVPQVLLPEEEKIMVEEMKNNGQTIIEEKSLVD
AVYALKDEVHELKKENKWMKQCLEEEQKSRKELERVVRKLAKQKNDCAWEDGGY
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaggagcagacagtaacgtggctgatatcgttaggggtgcttaattcaccc
aagaagaacatagctgacccagaggaatttctgaaaatctctctgaaagatggggtcgtc
ttgtgcaaactcatggagcggctcgtgcccggctctattccaaagtactgtcaggatccg
agaaacgaagccgactgcatcgccaatatcaatgagtttttgagaggatgcacatccttg
aaagtagagggatttgaaccagagtgcctgtacactggggagaactttaacaaagtgctg
accactctgctgggagtcaacttcgccacccaagactgtggcactgagaggtcatgtccc
cattccggcacgcccgctcctagccagtccaccacctcacacacacacgccacctccagg
tccaagtccctgcgcagacaatccaaaccagcggagatgtcggagaacggcgggggcggg
ctggtgctggtgaaggcgcgcttccaattcaagcagaacaacgaggatgagctgtccttc
aacaagggagacctgatcagtgtgttgcgccaggaggagggcggttggtgggagggctcg
ctcaacggcaagacgggctggttccccagcaactatgtccgcgaggtcaagccctgtgat
aaacctgtgtctcctaaagcaactcaactgaccaagagctactacagtgtggtggttcag
gacatcctggagcatgagagggagtttgtcaaggagctgcagacagtgttgagctgttac
ctacgacccctaaaggccagcgacaagctgagcattacagacagtggcagtctgagtggt
aacctggaggagatcctgaccttccagcagggtctggttcttgctctggacgagtgcacc
aaggttccagagagccagcagcgattggctgcctgttacctcaacctgattggtcagatc
aggacgctgtaccgatcctactgctccagtcacccctcggctgtctgcgtactcactgac
cacagtgaggagctgggtatgttcatggagagccagggggccagtacgccaggcatcctg
accctgaccaccagcttgagtaaacccttcatgaggctggacaagtaccccatcctgctg
caggagctggagagacacatggaggaggcccacccggactacagtgacatcatgaaggtg
acggtggcctttaagagcttggtgacccagtgtcaggacctgcggaagcgtaagaacctg
gaactacagatcctgtcagagccagtgagaggctgggagggagacggcatgaagtctctg
ggtcacgtggcctacatgtcccaggtccacatgcagaacgggaccaatgaggagaaagag
gagcgctacctcatgatgtttcccagtgtgctggtcatgctgtctgctagtccgcggatg
agcggcttcatataccagggaaggctgccactgacaggctccacagtctccagacagatg
gcggacacagagaacggccactacacttttgagatcacaggaagcacgatggatcgcgtc
acagtgttctgcagtaacccccaggagctgcaggagtggctggaccatctccatgcctac
accgaaggagcaagcccagtgggccccattatcaagaacgagttgggaaagccggtcagt
atggtgggcacccccactcaccaatcccacctgcccagcttcagcacccccagccaggcc
aaccggggacccctggagccccccaagaccaccaagccctggtccctgagctgcctgcgc
cccgccccacccctcaagccctccgctgcactgtgctacaaggagaggatgtcttatatc
ttgaaggactccagtaagagcccggggcccattaagaagttcctcccaaaacgcagagca
gaaagaaaacattccgacgatgagttcctcttgcggaaaagtacagctgctctggaggag
gatgcccagattctgaaggtgatcgaggcctactgcacaggggccagccagcatcagacc
aacacagcggtgaggaaagagtctgtccctcaggtcctgctgccggaggaagagaagatc
atggtggaggagatgaagaacaacggtcaaacaatcatagaagaaaagagtctggttgat
gcggtgtatgctttaaaggatgaggtccatgaattaaagaaggagaataagtggatgaag
caatgtctggaggaggagcagaagtctcgtaaggagctggagagagtggtcaggaagctg
gccaagcagaagaacgactgtgcctgggaggatggaggttactga
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