Coregonus clupeaformis (lake whitefish): 121532246
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Entry
121532246 CDS
T08357
Name
(RefSeq) class E basic helix-loop-helix protein 41
KO
K03730
class B basic helix-loop-helix protein 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121532246
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
121532246
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
121532246
NCBI-ProteinID:
XP_041694011
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Position
19:complement(52442603..52446732)
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AA seq
433 aa
AA seq
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MDERIPRLQDRQFMDHADFLGVEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQRIMALQNGDLSM
KMPIRADLDVFHSGFQACAKEVLQYLNKSENWNTCEQRCAQLISHLHKVSAQFQPGAPLL
HPQLPARDAVDRDGQKVDSQTGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKTDGNKGC
DRSKVQGPKAVKIKQEFGDDRAAKKTKMNWAGNCTTSADATTRPDLVFMNSLMGITGLGQ
QTPFCMPFYFINPSAAASYMPLFDKSNLEKFVYPAAAAATLSSQFHWLYPGLNSHASAAA
AAVAGVFSGISTEKSSGFGSDSKDSPSDDSDMSNVAEPGSSDEREDNLENDEDDYYDDKE
LGDDSPDNENDST
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagaataccgcgtctgcaggacaggcaatttatggatcatgccgatttctta
ggggtggaatactcctcactctacatgtgtaaatcgaaaagaggactgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgattgatagagaagaagaggagagacagaatc
aatgagtgtatcggacagttaaaggatttgttaccggaacatctcaaactgacgacgctc
gggcatttggagaaagcagttgttcttgagttaactttgaagcatttaaacgctttgact
gcagtcactgagcagcagcaccagaggattatggctttgcagaatggggatctatcgatg
aaaatgcccattcgcgctgatttggatgtgttccactcagggttccaagcgtgtgccaaa
gaggtcctgcagtacctaaacaagtcggagaactggaatacatgcgagcagcggtgcgcg
caactcatcagccacttacacaaagtctcagcgcagtttcagcccggtgcgccactactc
catccccagctacctgccagagacgcggtcgaccgcgatggccaaaaagtggacagccaa
accggacatgaccgcgtatcggtcatacagaggagccatggagagcttaacgagaatgac
acagacacagacagtggatacgggggtgaggcggaaaagactgatgggaataaaggatgt
gaccggagcaaagtgcaggggcccaaggcagtaaagataaagcaggagttcggggatgac
cgcgctgccaaaaaaacaaagatgaactgggctggaaactgcacgacgagcgcagacgcg
accaccagacctgatctggtctttatgaattcgttgatgggaataactggtttgggacag
cagactcccttttgcatgcccttttacttcatcaatccctcggcggcagcgtcctacatg
cctctattcgacaaaagtaacctagagaagtttgtgtacccagctgcagcagcggcgacg
ctgtcatcccagttccactggttataccccggcctcaactcacatgcgtccgcagctgcg
gccgcagtagccggtgttttttccggcatatcgacagagaagagctctggattcggttcc
gactccaaggactctccctccgacgacagtgacatgtcaaacgtggcggagccgggctca
tctgatgagagggaggacaatcttgagaatgatgaagatgattattatgatgataaggaa
ttaggggatgactccccagacaatgaaaatgacagtacataa
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