Coregonus clupeaformis (lake whitefish): 121532257
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Entry
121532257 CDS
T08357
Symbol
arntl2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121532257 (arntl2)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
121532257 (arntl2)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
bHLH_INO2
PAS_8
PAS_2
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
121532257
NCBI-ProteinID:
XP_041694026
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Position
19:52938811..52979175
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AA seq
644 aa
AA seq
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MSARNAAAGGGDRATGEPTGDVLVEENQSHSVSLPSLMTPTSAAGMTSGMELPRKRKGSM
DMETKSASNLVADMKDEEDRSEGEDSQAKIKCFREPHSQIEKRRRDKMNNLIDELSAMIP
TCNPMSRKLDKLTVLRMAVQHLKSLKGSTCSFTEANYKPSFLPDDELKHLILKAADGFLF
VVGCDRGKIVFVSESVAKTLNYSQTELIGQSLFDYIHPKDMGKVKEQLSASELYPRERLI
DAKTGLQVQADLPVGAARLCPGARRSFFCRMKYHKISVKQEDKEFQPSTSKKKESEKYCT
VHCTGYIRSWPTSQLGEEGGEGEADKDSSHFSCLVAVGRVHPHVASLVSGVNDVLVKATE
FVTRYAMDGKFTFVDQRATTVLGYLPQELLGTSCYEYFHQDDLPHLAERHRKVLRSKEKI
ETNCYKFRTKHGSFVTLQSQMFSFINPWTKEVEYIVSTNTVISSDHSRTDRSGDKAEQLS
NSKASEDDGNKSLPIILGISSTSSTMVYAGSIGTQIANELLDYNRMNSSPSSGNVSPFTV
LKDKSPLQLTLSSSNVPNGEVADLEMPGKSSSEEGEQQEHRRPQFPAGESLMGETSQLDM
ENMMDPGLGGLSNDEAAMAVIMSLLETDANLGEAVVMDEMNWSL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaggaatgcagcggctggcggcggtgacagagcgacaggggaaccgacaggg
gatgtgctggtggaggaaaaccaaagccattctgtctctctgcccagcttgatgaccccc
acctcagccgctggcatgacctcgggaatggaactgccccggaaacgcaagggaagcatg
gacatggaaaccaaatcggcctccaatctggttgcagatatgaaagatgaagaagaccgg
tctgaaggggaggactctcaggcaaaaattaaatgcttcagggaacctcacagccagatc
gagaagcggcggcgggacaagatgaacaacctgatcgacgagctgtcggccatgatcccc
acctgtaaccccatgtcccgcaagctggacaaactcactgtgctcaggatggctgtgcag
cacctcaaatccctcaaaggttccacctgttcctttactgaagccaattataagccttca
ttcctccctgatgacgagctcaaacacctcattctcaaggctgcagatgggttcctgttc
gtagtgggctgtgatcgcggaaaaatagtatttgtctcagagtccgtcgccaagacactg
aattacagccaaacagaactgattggacagagtctctttgactacattcacccaaaggac
atggggaaagtaaaggagcagctctcagcttctgagttatacccccgcgagagactaata
gatgccaaaacgggcctgcaggtccaggctgacctcccggtcggagcagctcggctgtgt
ccaggtgcgcgacgctccttcttctgccgcatgaagtaccacaagatatcagtcaaacag
gaggacaaggaattccagcccagtacctccaaaaagaaagagtctgagaagtactgcact
gtccactgcacgggctacatacgcagctggcccaccagtcagcttggggaggaagggggc
gagggggaggctgacaaggacagctcccacttcagctgcctggtggccgtgggccgcgtc
cacccccacgttgcctctctggtcagcggggtcaacgacgtcctggtcaaagcaacggag
ttcgtcacacgctatgccatggacggcaagttcaccttcgtcgaccaacgagccaccact
gtcctaggatacttaccccaggagctgcttgggacgtcatgctacgaatacttccatcaa
gatgacttgccacatttagcagaacgtcatcgaaaagtgctgcggagtaaagagaaaatt
gagacaaattgctacaaattcagaacgaaacatggctcttttgtcacactacaaagtcag
atgtttagttttataaatccctggaccaaagaagtagaatacatagtgtcaaccaatact
gtcatatccagtgaccacagtcgaacagacagatctggggacaaagcagaacagttgagt
aattccaaggcttctgaagacgatggcaataagtctctccccatcatcctggggatctcc
agtacttccagtaccatggtctacgcggggagtatcgggacccagatcgctaatgagctg
ctggactacaacaggatgaactcatccccatccagcggtaatgtcagccccttcactgtg
ctgaaggacaagtctcctctgcaactcacactgtccagcagcaacgtgccaaatggagag
gtggcagacctggagatgccagggaagtccagttcagaggaaggagaacaacaagaacac
agaagaccacaattccctgcaggagaatcactcatgggggaaacttcccagctggatatg
gagaatatgatggaccccggcctgggaggccttagtaatgatgaggcagccatggcagtg
ataatgagcctgctggagacggacgccaacctgggcgaggctgtggtcatggacgagatg
aactggtccctctga
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