Coregonus clupeaformis (lake whitefish): 121532258
Help
Entry
121532258 CDS
T08357
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121532258
Membrane trafficking [BR:
cclu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
121532258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
LMBR1
Motif
Other DBs
NCBI-GeneID:
121532258
NCBI-ProteinID:
XP_041694028
LinkDB
All DBs
Position
19:52988618..53035219
Genome browser
AA seq
1036 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKTMDYSNGLFDCQSPTSPFMGSLRALNLLEDLRGMLE
LMDTEEREGLRCQIPDATADSLVDWLQQGHLMSNGHHISMGGDLYQERLSRLEGDKESLV
LQVSVLTDQVEAQGEKIRDLDTCLDEHREKLNATEEMLQQELLCRTALETQKQDLMAEVS
NLKLNSFEKDRLHFDFSDNEDMVLEINELRYRVTEMESERLQYEKKLKSTKSLMAKLSSL
KIKVGQMQYEKQRKENKLQALKEELAMLRRHLEGRDGELRRLHDETGFRGITPVGMDSGD
RVSHPDETLKLRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELRQSLLRYKKVQDMISM
QGKKEKTQDGESDESNSDSSLSVMSTTTTPVAMESERHALAGVEEVAGKSPDELEMHYGA
TEVSSPTPIPTVQSACDPKRGPELDQAEPESEAGGQEVSQEAPLSCDTPQTLDGPNSGSQ
DNLYVSNSEKITLVMDEKPTEAVEEISKISERPPKSPSSSHPMTTEDDHFGNKKARSSFG
RGFFKIKGSKRTASTPNLDRSRSASAPMLAEIEREGGTDHLDLAGLPQRSANSDSTNTLT
SVTSTTSPECKKKSKGIKALFGKLRRSQSTTFNLDDNLSEPVEFKRGGVRATAGPRLGWS
RDLQRLPNNDLDTPFARWSKEQVCDWLQEQGLGLCLNMACVWISSGQTLLQASQQDLERE
LGIKHPLHRKKLQLALQALGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRVDGRM
LHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRRRPSDENNITPAEISQWTN
HRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATH
FNLLVGSEAQGLKQECLENPDYTLLTATAKVKPRKMSFGSFGSLRKKRQDDSEEYVCPMD
VEMPKGRSFQKGYELQLYEDDLDRLEQMEDSEGTVRQIGAFSEGIQNLTSMLKDDEFFKE
ISNSPNPSITDDDSNV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggcagcagccttggaacagatggatgggataata
gcaggctccaagactatggactactctaacgggctgtttgactgccagtcgcccacctct
cccttcatgggcagcctgcgggcgctgaacctgctggaggacctccggggcatgctggag
ctgatggacacggaggagagggagggcctgcgctgccagatccccgacgccaccgcagac
agcctggtggactggctgcagcagggacacctgatgtccaatggtcaccacatctccatg
ggtggtgatctctaccaggagagactgtctcgactggagggtgacaaggaatccctggtg
cttcaggtgagtgtgttgacagaccaggtggaggcgcagggggagaagataagggactta
gacacgtgtttggatgagcaccgggagaaactgaacgccactgaggagatgctacaacag
gagctcctgtgcagaacagctctagagactcagaaacaggacctgatggctgaggtgtcc
aacctgaagctgaactcatttgagaaggacagactgcactttgacttcagcgacaatgag
gacatggttctggagattaatgaactgaggtacagagtgaccgagatggagagtgaaaga
ctacagtatgagaagaaactgaaatccactaagtctctaatggccaagctttctagcctg
aaaatcaaagtgggccagatgcagtatgagaaacagaggaaggaaaacaaactgcaggcc
ctgaaggaggagctggcaatgctgaggaggcatctggagggaagggacggagagctgagg
aggttacacgacgagactgggttcagaggcatcacaccggttggcatggacagtggagac
agagtctctcacccagatgaaactcttaaattgaggctgaaagagaaacatgtggaagtg
cagagaatgaaaaaagcagtggaatcactcatggcagccaatgaggagaaggatcgtaag
atcgaggagctgaggcagtcgctgctgcgctacaagaaggtccaggacatgatttcaatg
caaggaaaaaaagagaaaacccaagacggcgagagtgacgagagtaatagcgacagctcc
ctctccgtgatgtcaacgacaaccaccccggttgccatggagtcggagaggcacgctcta
gccggagttgaggaagtagcagggaaaagcccagacgagctggagatgcactatggagct
actgaagtgtcttcgcccacacccatccctacagtccagtcagcatgcgatccaaagagg
gggccagagctggaccaagctgaaccagagagcgaggcagggggccaggaagtgtcacag
gaggcccccctttcatgtgatactccacagaccctggatggccccaattcagggagtcag
gacaacttgtatgtcagcaacagcgaaaagattacattggtgatggatgaaaagccaaca
gaggctgtggaggagatcagtaagatcagcgagcgcccgcccaagtctccctcttcgtct
caccccatgaccacggaggatgaccactttggtaacaagaaggctcgctcctccttcgga
cggggcttcttcaagatcaagggaagcaaaaggacagccagcacccctaacctggaccgc
agccggagtgcgagtgcgcctatgctagctgagattgagcgagaggggggcactgaccat
ctggacctggctggtctaccccagaggtcagccaacagcgacagcaccaacacactgacc
agtgtgacctccactacctcccccgagtgcaagaagaagtccaagggaattaaggcgctc
tttggaaagctgaggagaagtcagtccaccacgttcaacctggacgacaacctatcagaa
ccggtcgagttcaagagaggtggagtccgagccacagcagggcccagactgggctggtcc
cgtgacctacagagattacccaacaatgacctggacaccccgtttgcccgctggtccaag
gagcaggtgtgtgactggctgcaggagcaggggctggggctctgtctgaacatggcctgc
gtgtggatctcttctggacagactctgctgcaggcctcacagcaggacctagagagggag
ctgggcatcaaacacccgctgcacaggaagaagctccagctggccctgcaggccctgggc
tctgaggaggacgacaacaagggcaaactggactacaattgggtgaccaggtggctggat
gacattggcctgcctcaatataagacccagtttgatgaggggagggtggacggccgcatg
ctgcactacatgacagtagatgacttgctgtctctgaaggtgggcagtgtgctccaccac
ctcagcatcaagagagccattcaggtgctgcgcctcaacaactacgagcccaactgcctg
cgccgacggccctccgacgagaacaacatcacgccagcagagatctcccagtggaccaat
cacagagtgatggagtggctgagatcagtggacctggcggagtacgcccccaacctgagg
ggcagcggcgttcacgggggtctcatggtgctggagcctcggttcaatgtggagaccatg
gccctgctgctgaacattccccccaacaagaccctgctgcggaggcacctggctacccac
ttcaacctgctagtgggctctgaggcccaggggctcaaacaggagtgtctagagaatccc
gactacaccttgctcaccgccaccgccaaggtcaagccgaggaagatgtcgttcggtagc
ttcggcagcctgaggaagaagaggcaggatgacagtgaggagtatgtctgccccatggac
gtggagatgccaaagggacgtagcttccagaaaggctatgagcttcagctctacgaggac
gacctggaccggctagagcagatggaggactcagaggggactgtgaggcagatcggagcc
ttctccgagggcatccaaaacttgacgagcatgctgaaagacgatgaatttttcaaagag
atctccaactcacccaaccccagcataacagatgacgattccaacgtgtga
DBGET
integrated database retrieval system
