Coregonus clupeaformis (lake whitefish): 121532324
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Entry
121532324 CDS
T08357
Name
(RefSeq) transcription factor E2F4-like
KO
K04682
transcription factor E2F4/5
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04110
Cell cycle
cclu04218
Cellular senescence
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121532324
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
121532324
04218 Cellular senescence
121532324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121532324
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
121532324
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
HTH_Cmi2_C
Motif
Other DBs
NCBI-GeneID:
121532324
NCBI-ProteinID:
XP_045061107
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Position
19:56753925..56760375
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AA seq
399 aa
AA seq
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MELESGRTEFGAMGESLQPQTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVR
QKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCNTQEIADKLIDLKAELDDLDKREQE
LDQQRVWVQQSIKNVTDDSHNSPMAYVKHEDLCSAFKGDTLLAIRAPTGTQLEVPIPESV
LNGQKKYQIRLKSSAGPIEVLLVNKDPSSPSPVVLSVPPPEDMLQSLPVPATAANPKPAP
AAPCQPLAHSSNPSPATVSPACTATTNQAVTTAVSSNNTSTLTVSTPTTNITAQLTPLLD
TQPLLSSASLDGCSSSSSAVFEPIKTDPSELLYFPKELSDMFDPTKEIMSADLLEELMSS
EVFSPLLRLSPPPGDHDYIYNLDETEGLCDLFDVPILNL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagctggagtcgggaagaactgaatttggagccatgggagagtcgcttcaacctcaa
accccaagtagacacgagaagagtctaggattgcttacaaccaaatttgtatctttgctg
caagaggccaaggatggagttctagacctgaaagcagcagcagacaccctagctgtaaga
cagaagcggcgcatctacgacatcaccaatgtgctcgagggcatcggactgatcgagaag
aagtccaagaacagtattcagtggaagggtgttggtcctggctgtaacacacaggagata
gccgataagctcattgatctgaaggcagagctggatgatctggacaagagggagcaggag
ttggatcagcagagggtctgggtccagcagagcatcaagaacgtgacagacgactcacac
aacagccctatggcttatgtaaaacacgaagacctttgcagtgcgttcaaaggtgacact
ctcctagcgatccgcgctcccacaggcacacaactggaggtgcccatacctgagtcggta
ctgaatggacagaagaagtatcagatccgtctcaagagctcagcaggacccattgaggtt
ctcctagtgaacaaggacccatccagcccgtctccagtggtactgtccgtcccaccacca
gaggacatgctccagagcctgccagtgcctgctactgctgccaacccaaaaccggcacct
gctgccccttgccagcctctggcccactcctccaaccccagtcctgccacagtctcacct
gcctgcacagctactaccaaccaggcagtcaccaccgcagtgtccagcaacaacaccagc
acactgactgtttccacacccactacaaacataactgcccaactgactcccctgttggac
acccagcctctcctgtcctctgcctcattggatggctgctcttcctcttcttcagcagtc
tttgaaccaatcaagaccgacccctcagaattgctgtatttccccaaagaactttctgac
atgtttgacccgactaaagagatcatgagtgcagacctgttggaggagttgatgtcttcc
gaggtgttctctccactcctccgtctgtctccccctccgggtgaccacgactacatatat
aacctggacgaaaccgaaggcctgtgtgacctctttgatgtccctatccttaacctttga
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