KEGG   Coregonus clupeaformis (lake whitefish): 121532326
Entry
121532326         CDS       T08357                                 
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 3
  KO
K10275  F-box and leucine-rich repeat protein 9
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121532326 (lrrc29)
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     121532326 (lrrc29)
SSDB
Motif
Pfam: LRR_4 LRR_6 F-box-like F-box LRR_RPS2 LRR_At5g56370 F-box_5 LRR_Zer-1 LRR_At1g61320_AtMIF1 LRR_8 LRR_NXF1-5 SAM_Ste50p
Other DBs
NCBI-GeneID: 121532326
NCBI-ProteinID: XP_041694151
LinkDB
Position
19:complement(56807500..56818131)
AA seq 644 aa
METPELPLEIITYILSFLKASDRKEASLVCRSWYDASQDLQFQRNLTFKFPASISSLDLI
RGLSRRSSCSLVISHLDGSSMSRAMLQEIGLHLGPRLESLALPGSSVTESSLLALLPHLT
ALRRLDLRGLDSLFMSGAFLSREEHRQQVRVALADLKELDLSDLRYLSDLTFNRLTGCTP
RLRRISLAGCHIAFEFDPYRGCPVGPDSSALLSLRNLRRLLQEQASTVRGLDLSRTSITP
ESLRSVAQVEGLSLEELRLRGCKELTDYSVEVLCKHQPGLQILDLSACTELTSRAVLAVA
LGLKSLRLLSLSRDWRVKDKGLADLMVLPELRTLDLSECLHVSGAEIVKGLSAPEPRARL
ETLSLKSCTYIRDLAVFSLAQLLGSSLRELDLTSCIYLTDLSVGAIATYLPGLVVLRLGW
CKEITDWGLLGMVEPTKECEPSKEMEYKGPSFTRTFGNMGFFRPPSMPFQEKPRLVTDED
LGVFREQEGASLLALRSLQDLDLSACSKLTDSSITQVLRYPDLQRLSLAMLPEISDDSLA
SVAYHCRSLTSLELSHCPHISDQGIARAAPYLARLQHLYLSCCNTVTDRSLSMLVQHCKR
LRTLDISMCKHISLTTVELLQSQLPFIENVHCRFVGGADLTLTL
NT seq 1935 nt   +upstreamnt  +downstreamnt
atggaaacgcctgagttacctcttgagatcatcacctacattctgagtttcctcaaagcg
tcagacagaaaggaagcctctctggtctgcaggagctggtatgatgccagccaagacctc
caatttcagagaaatctcaccttcaagttcccagcctctatctcctccctggatctgatc
cggggcctgagtaggcgttccagctgcagcctggtcatcagccacctggatggctccagt
atgtcccgggctatgctgcaggagatagggcttcacctgggccctcggctggagagcctg
gccctgccggggagcagcgtgaccgagtcttccctcctggccctgctgccccacctgaca
gccctacgcaggctggacctccgtggcctggacagcctcttcatgtctggagccttcctg
tccagagaggagcaccgccagcaggttcgggtagctttagcagatcttaaggaactggat
ctctctgacctgcgctacctatcagacctcacctttaaccggctaacaggctgcactccc
agactacgccgtatctccctggctggatgccacatcgcctttgagtttgacccgtaccgt
ggctgccctgtggggcctgactcctctgccctgctctccctacggaacctccgcaggctg
ctgcaggagcaggcctctacagtgcgtgggttggacctgagcagaaccagcatcacccca
gagtcactgcgctctgtggcccaggtggagggcctgtctctggaagagctgcgtctgcgg
ggctgcaaggagctgacagactactctgtagaggtgctctgtaagcaccagcctggcctc
cagatcctggacctcagcgcctgcacagagctcaccagccgggctgtactagctgtggcc
ctgggcctgaagagcctccggctcctctctctgtcccgggactggagggtgaaggataaa
ggcctggctgacctgatggtgctgccggagctgaggaccctggatctgtctgagtgcctg
cacgtcagtggggccgagatagtgaaagggctctctgccccggagcccagggcacggctg
gagaccctcagcctcaagagctgcacctatatcagggacctggctgtgttctctctggct
cagctgctgggctccagtttgagagagctggacctcacctcctgcatctacctcacagac
ctgagtgtgggtgctatcgccacctaccttcccgggctggttgttctgcgactgggctgg
tgcaaggagatcacagactgggggctgctgggcatggtggagcccaccaaggagtgtgag
ccaagcaaagaaatggagtacaaggggcccagcttcacccgtacctttgggaacatgggt
ttcttccggcctcccagcatgcccttccaggagaagcctcggctggtgacggacgaggac
ctgggggtgttcagggaacaggagggggcctcactgctggccctcaggagccttcaggac
ctcgacctgtctgcctgctccaaactcaccgacagcagcatcacacaggtgctgcgttat
ccagacctccagcgcctctctctcgccatgttgcctgagatcagtgatgacagcctggcg
tcggtggcctaccactgtcgcagcctcaccagcctggaactcagccactgcccccacatc
agcgaccagggtatcgcccgtgcagccccttacctcgccaggctgcagcacctctacctg
tcctgctgcaacacagtcacagataggtctctctccatgctcgtccaacactgtaagaga
ctgcggacattggacatctccatgtgtaaacacatctccctaacaacggttgagctcctt
caatcacagcttccattcatagagaacgtccactgccgctttgtgggtggagctgacctg
accctcacactctga

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