Coregonus clupeaformis (lake whitefish): 121532326
Help
Entry
121532326 CDS
T08357
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 3
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121532326 (lrrc29)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121532326 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
LRR_RPS2
LRR_At5g56370
F-box_5
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_8
LRR_NXF1-5
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
121532326
NCBI-ProteinID:
XP_041694151
LinkDB
All DBs
Position
19:complement(56807500..56818131)
Genome browser
AA seq
644 aa
AA seq
DB search
METPELPLEIITYILSFLKASDRKEASLVCRSWYDASQDLQFQRNLTFKFPASISSLDLI
RGLSRRSSCSLVISHLDGSSMSRAMLQEIGLHLGPRLESLALPGSSVTESSLLALLPHLT
ALRRLDLRGLDSLFMSGAFLSREEHRQQVRVALADLKELDLSDLRYLSDLTFNRLTGCTP
RLRRISLAGCHIAFEFDPYRGCPVGPDSSALLSLRNLRRLLQEQASTVRGLDLSRTSITP
ESLRSVAQVEGLSLEELRLRGCKELTDYSVEVLCKHQPGLQILDLSACTELTSRAVLAVA
LGLKSLRLLSLSRDWRVKDKGLADLMVLPELRTLDLSECLHVSGAEIVKGLSAPEPRARL
ETLSLKSCTYIRDLAVFSLAQLLGSSLRELDLTSCIYLTDLSVGAIATYLPGLVVLRLGW
CKEITDWGLLGMVEPTKECEPSKEMEYKGPSFTRTFGNMGFFRPPSMPFQEKPRLVTDED
LGVFREQEGASLLALRSLQDLDLSACSKLTDSSITQVLRYPDLQRLSLAMLPEISDDSLA
SVAYHCRSLTSLELSHCPHISDQGIARAAPYLARLQHLYLSCCNTVTDRSLSMLVQHCKR
LRTLDISMCKHISLTTVELLQSQLPFIENVHCRFVGGADLTLTL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcctgagttacctcttgagatcatcacctacattctgagtttcctcaaagcg
tcagacagaaaggaagcctctctggtctgcaggagctggtatgatgccagccaagacctc
caatttcagagaaatctcaccttcaagttcccagcctctatctcctccctggatctgatc
cggggcctgagtaggcgttccagctgcagcctggtcatcagccacctggatggctccagt
atgtcccgggctatgctgcaggagatagggcttcacctgggccctcggctggagagcctg
gccctgccggggagcagcgtgaccgagtcttccctcctggccctgctgccccacctgaca
gccctacgcaggctggacctccgtggcctggacagcctcttcatgtctggagccttcctg
tccagagaggagcaccgccagcaggttcgggtagctttagcagatcttaaggaactggat
ctctctgacctgcgctacctatcagacctcacctttaaccggctaacaggctgcactccc
agactacgccgtatctccctggctggatgccacatcgcctttgagtttgacccgtaccgt
ggctgccctgtggggcctgactcctctgccctgctctccctacggaacctccgcaggctg
ctgcaggagcaggcctctacagtgcgtgggttggacctgagcagaaccagcatcacccca
gagtcactgcgctctgtggcccaggtggagggcctgtctctggaagagctgcgtctgcgg
ggctgcaaggagctgacagactactctgtagaggtgctctgtaagcaccagcctggcctc
cagatcctggacctcagcgcctgcacagagctcaccagccgggctgtactagctgtggcc
ctgggcctgaagagcctccggctcctctctctgtcccgggactggagggtgaaggataaa
ggcctggctgacctgatggtgctgccggagctgaggaccctggatctgtctgagtgcctg
cacgtcagtggggccgagatagtgaaagggctctctgccccggagcccagggcacggctg
gagaccctcagcctcaagagctgcacctatatcagggacctggctgtgttctctctggct
cagctgctgggctccagtttgagagagctggacctcacctcctgcatctacctcacagac
ctgagtgtgggtgctatcgccacctaccttcccgggctggttgttctgcgactgggctgg
tgcaaggagatcacagactgggggctgctgggcatggtggagcccaccaaggagtgtgag
ccaagcaaagaaatggagtacaaggggcccagcttcacccgtacctttgggaacatgggt
ttcttccggcctcccagcatgcccttccaggagaagcctcggctggtgacggacgaggac
ctgggggtgttcagggaacaggagggggcctcactgctggccctcaggagccttcaggac
ctcgacctgtctgcctgctccaaactcaccgacagcagcatcacacaggtgctgcgttat
ccagacctccagcgcctctctctcgccatgttgcctgagatcagtgatgacagcctggcg
tcggtggcctaccactgtcgcagcctcaccagcctggaactcagccactgcccccacatc
agcgaccagggtatcgcccgtgcagccccttacctcgccaggctgcagcacctctacctg
tcctgctgcaacacagtcacagataggtctctctccatgctcgtccaacactgtaagaga
ctgcggacattggacatctccatgtgtaaacacatctccctaacaacggttgagctcctt
caatcacagcttccattcatagagaacgtccactgccgctttgtgggtggagctgacctg
accctcacactctga
DBGET
integrated database retrieval system