Coregonus clupeaformis (lake whitefish): 121532535
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Entry
121532535 CDS
T08357
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a3-like isoform X1
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00190
Oxidative phosphorylation
cclu01100
Metabolic pathways
cclu04142
Lysosome
cclu04145
Phagosome
Module
cclu_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
121532535
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121532535
04142 Lysosome
121532535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121532535
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121532535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
APG6_N
SOGA
Motif
Other DBs
NCBI-GeneID:
121532535
NCBI-ProteinID:
XP_045060885
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Position
2:26877572..26889360
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AA seq
826 aa
AA seq
DB search
MGSMFRSEEVCLVQIFLQSGSAYNCVSELGELGLVEFRDLNPNVNSFQRKFVGEVRRCEE
LEKTFSFLEQEINRSLWPPLNGPLPPPCPTPSAPQPRELITIEEESERLARELKEVSRNR
DSLRAQMTELSQYKGVLTKTHSLTASQGPPPPLETVGILEPNRQDVHLSFVAGVVHPWKV
PSFERLLWRACRGYIIVDFREMEEQLEHPDTGEMQWTVFLISYWGDQIGQKVKKICDCFH
THTFAYPDSPTEREEILQGLQGRIEDIKSVLSQTEHYLQQLLVRAVAVLPQWKVRVQKCK
AVQAVMNLCSPSVTDKCLIAEAWCPVSKLPELQSALREGGRKSGSGVDSFYNRLPCSTPP
PTLFPTNSFTAGFQSIVEAYGVASYREVNPAVYTIITFPFLFAVMFGDVGHGLLMFLAAL
WMVLEEKDPKLRNNTNEIWRMMFGGRYLILLMGLFSIYTGAIYNECFSRGLSPFSSGWHV
RAMFEEGVWKSTTLKENNFLSLDPNITGVFTGPYPFGIDPIWGLSNNHLTFLNSYKMKMS
VIIGVIHMTFGVCLSFFNYKHFNQLSSVFLVLIPELFFMLFLFGYLVFMVIFKWLAFDTA
HSNSAPSILIHFIDMFLFTENKENPPLYKGQVVVQEVLVVLALCSVPVLLLGKPIHQYIT
YKMNHRHMASERRPLLAENNSINAHQGEVETGSHRGEVEFDAADVFMHQAIHTIEYCLGC
ISNTASYLRLWALSLAHAQLSEVLWVMVMRIALTGQGYVGSVVLFVVFSFFAVLTVAILL
VMEGLSAFLHALRLHWVEFQNKFYSGTGYKLNPFSFSSLIHTSSAM
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgggttctatgttccgcagtgaggaggtgtgcctggtgcagatcttcctccagtctggt
tcggcctacaactgtgtcagtgaactgggagaactgggcctggtcgagttcagagatttg
aaccccaacgtcaactccttccagaggaagtttgtgggggaggtgagacgatgtgaggaa
ctggagaaaaccttctcgttcctggagcaggagatcaatcggtctctgtggccccccctc
aatggccccctccctcccccctgcccgaccccctcggccccccagcccagagagctgatc
accatcgaggaggagagtgagaggctggccagggagctcaaagaggtgtccaggaacaga
gacagtctcagagcccagatgaccgagctcagccaatacaaaggggttctcacgaagacc
cactccctcaccgcctcacagggtccgcctcctccactggaaacagtaggcattttggag
cctaaccgacaggatgtccacctcagttttgtggccggtgtggtccacccctggaaagtc
ccttcgttcgagcggttgctatggcgagcgtgccgtggttacatcatcgtggacttcaga
gagatggaggagcaactagagcatcctgacacgggggagatgcagtggacagtcttcctc
atatcctactggggagatcagatcggacagaaggtcaagaagatctgtgattgcttccac
acacatacgtttgcgtaccccgacagccccacggagagagaggagattctccagggactg
cagggcagaattgaagacatcaaatctgtcctctcccagacagagcactacctccagcag
ctgttggtgcgtgctgtagcagtgctgccccagtggaaggtgcgggtccagaagtgtaag
gctgtccaggccgtgatgaacctctgcagcccctccgtcaccgacaagtgtctgatcgct
gaggcctggtgtcccgtcagcaagctgcctgaactacagagtgccctgagagagggaggg
aggaagagtggcagcggggtggactcgttctacaaccgcctcccctgctccacccctcct
cctaccctgttccctaccaactccttcacggccggcttccagagcatcgtagaggcctat
ggagtggccagttaccgcgaggtcaacccagccgtgtacaccatcatcacgttccccttc
ctgtttgcggtgatgtttggggacgtgggtcacggcctgctgatgttcctggctgccctc
tggatggtcctggaggagaaggaccccaaactcaggaacaacaccaatgagatatggagg
atgatgtttggagggcgctatctgatcctgttgatgggactgttctctatctacactggg
gccatctacaatgagtgtttcagcagaggactcagccccttcagctccggctggcacgta
cgagccatgttcgaggaaggagtgtggaaatcaacaactcttaaagagaacaacttcctg
tccctggaccctaacatcactggtgtttttaccggaccctatccttttggcatcgacccg
atctggggtctgtccaacaaccacctgacattcctcaactcctacaagatgaagatgtcc
gtcatcatcggggtcatccacatgaccttcggagtctgtctgtccttcttcaactacaaa
cactttaaccagttgagcagtgtattcctggtactgatcccagagctgttcttcatgctg
tttctgtttggttacctggtcttcatggtcatcttcaagtggctggcctttgacacggcc
cactctaactccgcccccagcatcctcatccacttcatagacatgttcctattcaccgag
aacaaggaaaacccgcccctctacaaaggacaggtggtggtgcaggaggtcctggtggtg
ctggcgctgtgttcagttccagtcctactgctggggaaacccatccatcaatacatcaca
tacaagatgaaccaccggcacatggcaagcgagagacgccccctattagctgagaacaat
tccatcaacgctcatcagggagaggtggagacaggaagtcacagaggggaggtggagttt
gatgctgctgatgtcttcatgcaccaggccatccacaccatagagtactgtctaggctgc
atctccaacacagcctcttacttacgactgtgggccctcagcctcgcacacgcacagctg
tcagaggtgctctgggtgatggtgatgcgtatcgccctaaccgggcaaggctacgtggga
tctgtggtcctgtttgtagtcttttccttcttcgccgtgctgacagtcgccatcctcctg
gtcatggagggcctgtctgccttcctgcatgccctgcgtctgcactgggtggagttccag
aataagttctacagtggaacaggctacaagctgaaccctttctccttctcatccctgatc
cacacctcgtccgctatgtga
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