Coregonus clupeaformis (lake whitefish): 121532544
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Entry
121532544 CDS
T08357
Name
(RefSeq) tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121532544
Enzymes [BR:
cclu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
121532544
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121532544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
TPD
Motif
Other DBs
NCBI-GeneID:
121532544
NCBI-ProteinID:
XP_045074521
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MLPLKEKDGPIVKKLLEAGCCARCVLRFCCLGVQSAYRQSYEDTAKALCAFISDSENNES
QDAAVLEQHTEDPPSKKRKMDAAETYVQSEGDSAVVPTVMEEGDAKPADSDVCVACLGVL
QELCDKAYAIKISEVVKAENYQFDTMVLSVSLPAQLSVREHSCWLHVKKEVREKSMCLDK
DDVIQVKEAFKWTMQGLVSKELGGVPVVNKISRQTEQFEVGVGFTHPETDSDCHFLAGIC
SDCFRPTKNKQNIFTRMAVVKALEKVSDEKFLKKFPCPPTRPASKCIAQDVHCLHVSVFV
AGRYNKFSRSLPQTPWVIDGERRMESSVEELIAAPLLSSFRAEGFNFSSSGREDVDVRTL
GNGRPFALELLNPHRARFNKAEVRQLQETINQSSDKIRVRDLQIVSRDAMGHMKEGEEDK
TKSYAALIWTQKAIDKDNITFLEETKELKLAQKTPLRVLHRRPLAVRERVIHTMSTRFLD
AHHFHLKLRTQAGTYIKEFVHGDFGRTKPNLCDLLKTETDILELDVESVDVDWPPSIPE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctgaaggagaaagatggaccaatagtgaagaagctgctggaagctggatgc
tgcgcccgctgtgtcctgaggttctgctgcttgggggtgcagtcggcctaccgccaatct
tatgaggatacagcaaaggcgctttgtgctttcatcagtgattcagagaataatgaatcc
caagatgcagccgtgctggagcagcacacagaagacccccctagtaaaaaaaggaagatg
gatgccgcggagacgtatgtccagtcagaaggcgactctgccgtggttcccacggtgatg
gaggaaggcgatgccaagccagcggactcggacgtgtgtgtggcgtgcctgggagttcta
caggagttatgtgataaagcctatgccataaagatatcggaggtggtgaaggccgaaaac
taccagtttgacacgatggtactgtccgtctccctaccggcccagctgtctgtcagagag
cactcttgttggctgcatgtaaagaaggaagtgagggagaagtctatgtgcctcgataag
gatgatgtcatccaggtgaaggaggccttcaagtggacaatgcagggtctggtgtccaaa
gagctggggggagtacctgtggtgaacaagatcagtcgacaaactgaacagtttgaggtg
ggcgtggggttcacacacccagagacagactcagactgccacttcctggctggcatctgt
tcagactgcttcagaccaactaagaacaaacagaatatcttcactagaatggccgtggtc
aaagccctcgagaaggtttccgatgagaagtttctaaaaaagttcccctgtccccctaca
cggccagcgagcaaatgcatcgctcaagacgtccattgtcttcacgtttctgtatttgtg
gcggggaggtacaacaagttctcccgcagcctgccccagaccccctgggtgattgacgga
gagaggaggatggagtcttcggtggaggagctaatcgctgcacccctcctctcctctttc
cgggcggaggggtttaatttctcctcctcaggaagggaggacgtggatgtgcggacgctt
ggaaatggtcgtccgtttgcactggagctgctaaatcctcacagagccaggttcaataag
gcagaagtccgacagctgcaggagaccatcaaccagtcctcagacaaaatcagagtacga
gatctacagatcgttagcagagatgctatgggccacatgaaggagggtgaggaggacaag
accaagtcgtacgccgccctcatatggacccagaaagccatcgacaaagacaacatcaca
ttcttagaggaaaccaaagagttgaagctagctcagaaaacgccactaagagtgttgcat
cgcaggccgctggccgtcagagagcgggtcatccacaccatgagtacacgcttcctggac
gcgcatcacttccacctgaagctgcgcacgcaggcagggacttacatcaaggagtttgtc
cacggagactttggtcgcaccaagccaaatctgtgtgatctgctgaagactgagacggat
atcctagagctggacgttgagtctgtagatgtggactggccaccctccatcccggagtga
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