Coregonus clupeaformis (lake whitefish): 121532623
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Entry
121532623 CDS
T08357
Symbol
poll
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03410
Base excision repair
cclu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121532623 (poll)
03450 Non-homologous end-joining
121532623 (poll)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121532623 (poll)
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121532623 (poll)
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121532623 (poll)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
121532623 (poll)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
BRCT_2
NTP_transf_2
PTCB-BRCT
HHH
Motif
Other DBs
NCBI-GeneID:
121532623
NCBI-ProteinID:
XP_041694347
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All DBs
Position
20:697127..708341
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AA seq
567 aa
AA seq
DB search
MSAYGIMKAFPKVKRAGAREGKDAPPPKRKSDETVPVTGTAFQGVTVHILPTGIGNARCQ
IFQRQIVQNGGQTESSLCPTVTHVVVDDSMDCDRAFRLLKVDRLPSGVYLLKCTWLSTCI
SEKRLLDTADYSLLNPDKDMETTKEDVKEDVLNSVPLPATQDMKQPIPDETKPDESTETV
QDTKDDFKDEYGVSQSDLEALISGLHPKDETPSPSTAAAPSDPQQKPLSGKWVCAQSSQS
KVDNYNKHITDKLEVLAKAYTHQGDRWRALGYSKAVNALKSYHKPITSYEEACKIQGIGK
KMADKVMEIMESGHLRKIDHLGEAVPVLELFTNIWGAGAKTAQIWYTQGFRTLEDIRTKA
NLNHNQIIGLKHYDDFLDRMPREEAAAIEKTVREAAQFLDPGLLAMACGSYRRGKATCGD
VDVLISHPDGKSHRGVFSKVLQILHQSGFLTDDLVSQEESGEQKKYMGVCHLPGPGRRHR
RLDIIVVPYGEFACSLMYFTGSAHFNRSMRALAKTKRMSLSEHSLNSDVLRQGSLKVYGG
TPLPTLTEKDVFTHLGIPFREPQERDW
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctacggaattatgaaagctttccccaaagtgaagagagcaggggcacgtgag
ggaaaggatgcacccccaccaaagaggaagtctgatgaaactgtacctgttacagggact
gctttccagggcgtcaccgtacacatattaccaaccggcatcgggaacgccagatgtcag
atcttccagagacagattgtccagaatggaggccagactgagagctccctctgtcccact
gtcacccacgttgtagtggatgacagtatggactgtgacagggctttcaggctgctcaaa
gtggacaggctgccctctggagtttatttgttgaagtgcacctggctcagtacctgcatc
agtgagaagagactgctggatacagcagactacagcctactcaacccagacaaagacatg
gaaactacaaaggaggatgtcaaagaagacgtgctcaacagtgtcccactcccagccaca
caggacatgaagcagccgatccctgatgaaacaaaaccagatgagtcaacagagactgtc
caagacactaaagacgacttcaaagacgaatatggcgtctcccagagcgatctggaggct
ctgatcagcggcctgcaccccaaggacgagacccctagccccagtactgccgctgccccc
tcagacccccaacagaagcctctctcagggaagtgggtgtgtgcccagtcctcccagtcc
aaggttgacaactacaacaagcacatcacagataaactggaggtgcttgccaaggcctac
acgcaccagggagacagatggagagcgctgggctactccaaagccgtcaacgccctcaag
agctaccacaagcctatcacgtcctatgaggaggcctgtaagatccagggcattgggaag
aagatggctgacaaggtcatggagatcatggagagtgggcacctccgtaagatagaccac
ttgggagaggcagtgccagtactggagctgttcaccaatatctggggggcaggggccaag
actgcccagatttggtacacacaggggttccgcactttggaggacatccgcaccaaggcc
aatctgaaccacaaccagataattggactcaaacactacgacgactttctggaccggatg
cccagagaagaggcagccgccattgaaaaaacggtgagggaggcagctcagtttctggac
ccgggcctgttggccatggcctgtggttcgtaccggcgggggaaggctacgtgtggagat
gttgacgtcctcatctctcacccagacgggaagtcccaccggggtgtctttagcaaagtg
ttacagatcctccaccagagcggcttcctgacagacgacctagtgagccaagaggagagc
ggcgagcagaagaagtacatgggtgtgtgtcatctgccaggacctggccggcgacaccgc
cgcctcgacatcatcgtggtgccctacggcgagtttgcctgctccctcatgtacttcacc
ggctcggcacacttcaaccgctctatgagggcattggccaagaccaaacgcatgagccta
tcagagcactcgttgaacagcgatgtgttgagacaaggaagtttgaaggtgtatgggggg
acaccactacccacactcactgagaaggatgtcttcacccatctgggaatacctttcagg
gaacctcaggaaagagactggtga
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