Coregonus clupeaformis (lake whitefish): 121532650
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Entry
121532650 CDS
T08357
Name
(RefSeq) long-chain fatty acid transport protein 1-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03320
PPAR signaling pathway
cclu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121532650
09158 Development and regeneration
04382 Cornified envelope formation
121532650
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cclu01004
]
121532650
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121532650
Lipid biosynthesis proteins [BR:
cclu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121532650
Transporters [BR:
cclu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121532650
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121532650
NCBI-ProteinID:
XP_045082929
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Position
18:complement(4713398..4734589)
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AA seq
654 aa
AA seq
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MMEIIIMLLGSVSASLRSIGVVLSSVPWSWTLAAGLGLYLTAGGWRFLYVALRTAKRDLI
GLYVLLRVKYCIRQHLRNNSTVPSMFAHTVALYPDKPALVWESTGEVWTFRELAGRCHQV
AHWARTQGWGKGDVVALYLESRPLVVVLWMGLAQVGVEAALINFNLRSDSLLHCVGVSRA
KGVVFGVELAEAVLEVSCSLDQSMVLFSTGAGLGEDHPALSTLSAQNLDSLLTSFPRDPP
PVTHIKGFNDRLFYIYTSGTTGMPKAAIVVHSRYYRIAAFGFHSFGLRHDDIIYNCLPLY
HSAGNIMGVGQCLLHGLTVVVRSKFSASRFWDDCVKYNCTVVQYIGEMCRYLLAQPERPS
QVCHRVRVAVGNGLRPAVWEEFTQRFRIHQVAEFYGATECNCSIANMDGKVGACGFNSRI
LPSVYPIRLIQVNEGTVELVRDRHGLCIPCQPGEPGLLVGCINQNDPLRRFDGYADQSAT
NKKIAHNVFRKGDMAYLSGDVLVMDDLGYMYFRDRSGDTYRWRGENVSTTEVEATLSGLL
GQTDVAVYGVTLPGVEGKAGMAAIAEGADQFDFDVFLGAVQKALPPYARPLFLRLLPQVD
TTGTFKIQKTRLQKEGYDPRHSADRIYFLNSRAGCYEVVTEELYIAITEGRMSL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaatcataataatgctacttggcagtgtgtctgcatctctgagatccataggg
gtggtgctcagttctgtaccctggtcatggaccctggcggctgggttaggactgtacctc
accgcggggggatggaggttcctctatgtggctctacgaaccgccaagagagacctaata
ggtctatatgtgctgctgcgtgttaaatactgcatccggcagcacctccgtaacaacagt
actgtaccttccatgtttgcccatacggtggcgctatacccagacaagcctgcgctggtc
tgggagtctaccggagaggtgtggaccttcagggagctggcagggcgatgccaccaggtt
gcccattgggcacggacacagggctggggaaagggggacgtggtagccctctacctggag
agtcgccccctagtggtggtgctgtggatgggcctggcgcaggtgggtgtggaagcggcc
ctcatcaacttcaacctgcgcagtgattcgctgcttcactgtgtgggtgtgtccagagcg
aagggggtggtgtttggggtggagctagcagaagctgtgttggaggtgtcttgttctcta
gaccagtctatggtactgttcagtactggggctggtctgggtgaggaccaccctgccctc
tctaccctctcagcccaaaacctggactctttactgacctcctttccccgggacccccct
cctgtcacacacatcaagggattcaatgatagactattctatatctatacctctggtaca
acaggaatgcctaaggctgctattgtggtgcatagtaggtactatcgcatcgctgccttt
gggttccattccttcggcctgcgtcacgatgacataatctacaactgtttgcctctctac
cactccgctggtaacattatgggtgtgggacagtgtctgctccatgggttaactgttgta
gtgaggagtaaattctctgctagccgtttctgggacgactgtgtcaagtacaactgcacg
gtggttcagtatataggtgagatgtgcaggtacctgttggcccagccagaacgtccctcc
caggtgtgtcaccgtgtgcgtgttgccgtgggtaacgggctccgccccgccgtgtgggag
gagtttacacagcgcttcaggattcaccaggtggcagagttctacggcgccaccgagtgt
aactgtagcatcgcaaatatggacggaaaggtgggtgcgtgtgggttcaacagtcgcatc
ctgcccagtgtgtaccccatcagactgattcaggtgaacgaggggacggtggagctagta
cgggacagacacgggctctgtataccctgtcaacctggtgaaccaggtctcctggttggt
tgtataaaccagaatgatcctttgaggaggtttgatggttatgccgaccagagcgccacc
aataagaagatagctcacaacgtcttcaggaagggagacatggcatatctctcaggtgat
gtgttggtgatggatgatttggggtacatgtatttccgggaccgtagtggagacacgtat
cgctggagaggagagaacgtctcgactacggaggtcgaggcaacactcagcggtctgctg
ggacagactgacgtagcagtctatggagtcactctgccaggtgtggagggaaaggctggg
atggcagccattgctgagggtgcggatcagtttgactttgatgtgttcttgggggcggtg
cagaaagccctgcctccctacgcacgcccactcttcctccggctccttccccaggtcgac
accacaggcaccttcaaaatccagaagacccgtctgcagaaggagggatacgaccctcgg
cactctgctgaccggatctacttcctcaacagccgtgcaggatgttatgaggttgttact
gaggagttgtatattgccattacagagggaagaatgtctctatga
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