Coregonus clupeaformis (lake whitefish): 121532755
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Entry
121532755 CDS
T08357
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121532755
Cell adhesion molecules [BR:
cclu04515
]
Cadherins
Protocadherins
121532755
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
121532755
NCBI-ProteinID:
XP_041694485
LinkDB
All DBs
Position
2:27664053..27673032
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AA seq
1026 aa
AA seq
DB search
MEHRLLSTRWTPLTGLVVCLLVCACVVDLVLAQIRYSIPEELEHGAFIGNIAEDLGLDVA
KLSSRRFRIVSGAKKQYLEVNLENGILFVNEKIDREELCERSPTCFLHLQVVIENPLELF
RVEVEILDVNDKSPSFPWSEFNLEITESAAPGSRFPLESAQDQDVGTNSLRSYQLSSNEH
FVLNIQTRNDRSKFAELVLETPLDREQQKTHEMVLTAVDGGSPERSGTALITITVLDAND
NMPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGANGEVSYAFSGHAPLKVRELFSVDQ
YTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDVNDNTPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDREA
FSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFAQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQA
QDAGFPPLSSNVTLHVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITVLD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRFVDKDATRQRLIILVKDNGQPPLS
ATVSILLSVAENVPESLSDFGDLTLSPQPSSNLAFYLIVSLSTISLIFLVAIIVLAAVKC
YKDRETPSGYNLPPFACCCCRGFQPEPPPEVFKKSNLNLQISTGAKVPTNCMEVNGNGTL
SQAYCYKVCLTPESAKSDFMFLKPCSPSSIPRNNEAKDADNFAWSAHNRSASVNNNSGAT
TPNELKQPNTDWTLTKNQNSSLKSYNSINMDGTLMRKAMHADPENYMTPMTGQYWTWGTR
MRDYKMSPPATGPPLRSWTPRCTPSPQQQPQPQPQQPQQPPLPPHPHPHPHPHPHPHPPP
DYQHNVYIPGTPSALCTLRPAATHHRSELDVHNSFSTFGKKIRFIHNYEPQTDAAAAVIN
NDLYND
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggagcacaggctcttgagcacccggtggacaccgttaactgggctggtagtgtgcctg
ctggtgtgcgcgtgtgtggtggacctggttctcgcacagattcggtactctatccccgag
gagttggagcacggggcttttatcggtaacatcgccgaggacctgggcttggatgtagcc
aagctgtcctctcggcggttccggatagtatccggggccaaaaaacaatacttagaggtg
aatctggaaaacggtattttattcgttaatgagaagattgaccgcgaggaactgtgtgaa
cggagtccgacctgcttcttacacttgcaagtggtgatcgagaatccattagaactgttc
cgagtggaggtggagattttggatgtgaatgacaaatctcccagtttcccatggagcgag
tttaatctggagattacagagtcagcggcgcccgggtctcggttcccgttggagagtgcg
caggaccaggacgtgggcaccaactcgctccgctcctaccagctgagctccaacgagcac
tttgtgctgaacatccagacgcgtaatgacaggagcaagttcgctgagctagtgctggag
accccactggaccgggagcagcagaagacgcacgagatggtgctcacagccgtggacggg
gggtcgcctgagcgctcgggcacagctctcatcaccatcacggtgctggatgccaacgac
aacatgcccgttttcgaccggtctgtttaccgggcgagccttgtagaaaacgcaccgaga
gggactttagtgctgaagctaaatgctactgatttggacgagggtgcgaacggcgaggtg
tcctatgcattcagtgggcacgcaccactcaaagtgcgggagctgttcagcgtggaccag
tacacgggtgagatccgagtgaaggggattgtggactatgagaaagcgagtgtgtatgaa
ctgtatgtgcaggctaaagacaggggtccctcggctgtggccgtgcacagtaaggtactg
gtggatatcttagatgtgaatgacaacacgccagaagtcatcctcacctccgtgtccaca
cctgtccaggaggacgcaccacctggaacggtgatagccgttataagcgtcatggaccgg
gactcgggagagaacgggaatgtggactgccagatccccagcaacgtcccctttcagctc
cactcctcttttaagaactactacactttggtgactagcgagtttctcgacagagaagcc
ttctccgagtacaacatcaccctcacggcccgggacttgggctccccgtcgctttccacg
aggaaaaccatcctcgtccaagtgtctgacattaacgacaaccccccgcgcttcgctcag
ccatcatacacagtttatgtgactgagaataacgccccgggcgcatccatttgctcagtc
actgctttcgaccccgattctaaccagaacgcctatctgtcctactcgattctggagggt
cagatccagggtatgcccgtgtccacttacgtatccatcaactcggacaacggaaacatc
tacgcgctgcgctcctttgactacgagcagctaaggaactttcagatacgggtgcaggct
caggacgccggtttccccccactcagcagcaatgtcacattacatgtgttcgttttggac
cagaacgacaacgctccagtcatcgtgtcccccttgcccaagaacgggactgtggcgaca
gaggtggtcccgaggtcagtggatgcggggtacctagtcaccaagatcactgtgctagat
gcggacgcaggtcagaactcccgcctctcctaccaggtgctccaggctacggacccgggt
ctgtttagtgtcgccctctacacaggagaaatcaggacgattcgccggttcgtggataag
gacgctacgaggcagagactcatcatcctggtcaaggacaacggccagccgcctctctcc
gccaccgtctccatcctcctctctgtggccgagaacgtgcccgagtccctgtctgatttc
ggagacctcactctgagcccgcagccctcatccaacctcgccttctacttgatcgtgtca
ctgagcaccatctcgctaatcttcctggtggctattatcgtgctggctgcggtcaagtgt
tacaaggacagagagacccccagcgggtacaacctccccccctttgcctgctgctgctgc
aggggcttccagccagagccaccccccgaggtgttcaagaaatctaacctgaacctgcaa
atctccaccggggctaaggtgcccaccaactgcatggaggtaaatggcaacggtactctg
tcccaagcctactgctataaagtgtgtctgacccccgagtcagctaagagtgactttatg
ttcctgaagccgtgcagccccagcagcatcccgaggaacaacgaggcgaaggatgctgac
aactttgcttggagcgcgcacaaccgaagcgcatcggtgaataacaattccggagccacc
actccgaatgagctcaagcaaccaaacacagactggaccctcacaaagaaccagaactcc
tctctgaaaagctataactctatcaacatggacggcactctgatgaggaaggccatgcat
gcagacccagagaactacatgacacccatgactggccagtactggacctggggcacccgc
atgagggactataagatgtctcctcctgccactgggcctcctcttcgctcctggaccccc
cggtgcaccccatcaccccagcaacagccccaaccccaaccccagcagcctcagcaacct
ccactccccccccacccccatcctcacccccatcctcaccctcacccccacccacctcca
gactaccaacataacgtgtacatcccgggcacgccgtcggccctgtgcaccctgaggcca
gcagccacccaccaccgcagcgagctggatgtccacaactccttctccaccttcggcaag
aaaatacgcttcatccacaactacgagccccagacagacgcagcagcagctgtcatcaac
aacgacctgtataatgattaa
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