KEGG   Coregonus clupeaformis (lake whitefish): 121532777
Entry
121532777         CDS       T08357                                 
Symbol
her6
Name
(RefSeq) hairy-related 6
  KO
K06054  hairy and enhancer of split 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03460  Fanconi anemia pathway
cclu04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121532777 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    121532777 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121532777 (her6)
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121532777 (her6)
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    121532777 (her6)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     121532777 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH Spectrin_1st_PEPL bHLH_NCOA
Other DBs
NCBI-GeneID: 121532777
NCBI-ProteinID: XP_041694507
LinkDB
Position
20:13206379..13208362
AA seq 267 aa
MPADMMEKNSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECTNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQISAGPPHPSFGQSMVQMPNS
SPQGNVMPLPCKGGSPQSMSPEATKVYGGFQLVPATDGQFAFLIPNAAFAPNGPVIPVYA
NQVNTPVPAAVSPGAPTGNSDSVWRPW
NT seq 804 nt   +upstreamnt  +downstreamnt
atgcctgccgatatgatggaaaaaaactcatcctctccggttgctgctaccccagccagc
atgaacacgacacctgataaacccaagacggcttccgagcacaggaagtcatccaaacct
atcatggagaagaggagaagagccagaatcaacgaaagcttgggacagttgaaaacactt
atcctggatgcgctcaaaaaagatagctctagacactcaaaacttgaaaaggcagacatc
ctggagatgacggtgaaacatctccggaacctccagagagctcaaatgactgctgctttg
aacactgatcccaccgtgctggggaaatacagagctggattcagcgagtgcacgaatgaa
gtcacccggttcctgtccacctgcgagggggttaacaccgaggtcaggacgcggcttctc
ggtcacttggccagctgcatgacgcagatcaacgctatgaactaccccacgcagcaccag
atctcagccgggcctccccacccctccttcggccagtccatggtacagatgcccaactct
tctccccaaggcaacgtgatgcccctgccttgtaaaggtggctctccccagagcatgtca
ccagaagccactaaagtatacggcggtttccagctcgtacctgccacagacggacaattc
gccttcctcatccccaacgcagcttttgctcccaacggtccggttatccccgtgtacgcg
aaccaggtcaacacgcctgttccagcggcggtgtcccctggtgcaccaacaggcaactcg
gactcagtgtggcgaccctggtag

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