Coregonus clupeaformis (lake whitefish): 121532797
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Entry
121532797 CDS
T08357
Symbol
tmco1
Name
(RefSeq) calcium load-activated calcium channel
KO
K21891
calcium load-activated calcium channel
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121532797 (tmco1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121532797 (tmco1)
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
121532797 (tmco1)
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121532797 (tmco1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMC3_TMCO1
DUF6809
DUF2368
Vpu
DUF5683
Exonuc_VII_L
DUF4257
DivIC
DSHCT
Piezo_TM1-24
DLH
Peptidase_S49_N
Nucleoside_tran
ATG14
Motif
Other DBs
NCBI-GeneID:
121532797
NCBI-ProteinID:
XP_041694523
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All DBs
Position
20:complement(29691764..29696915)
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AA seq
188 aa
AA seq
DB search
MTTMFADTILIVFISVCTALLAEGITWVLVYRTAKYKSLKAEVEKQSKKLEKKKETITES
AGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFV
PLSYIQGLSHRNLLGEDFTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGP
PPQAAKFS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgttcgcagacactattcttattgtgttcatctctgtttgcacagctctg
ttagctgagggaattacatgggtgctggtgtatcgtactgcgaagtacaagagtctgaag
gcagaggtggaaaagcaaagcaagaaattggagaagaagaaggaaaccattacagaatct
gcaggacgtcaacagaagaaaaagattgagagacaagaggagaaactgaagaacaacaac
agagatctatccatggtacgaatgaagtccatgttcgccattggcttctgtttcacagcg
ttgatgggaatgttcaactccatctttgatggaagggtggtggccaaactgccattcgtc
ccactgtcctacattcagggcctttcccatcgcaaccttctgggcgaggacttcactgac
tgctccttcatcttcctgtacattctctgcaccatgtccatcagacagaacatccagaag
atgctgggtctggccccctccagagctgccaccaagcaggctggaggtttcttgggaccc
cctccccaggcagctaagttctcctaa
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