Coregonus clupeaformis (lake whitefish): 121532813
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Entry
121532813 CDS
T08357
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121532813 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cclu03021
]
121532813 (taf4b)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121532813 (taf4b)
Transcription machinery [BR:
cclu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121532813 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
121532813 (taf4b)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121532813 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
121532813
NCBI-ProteinID:
XP_041694537
LinkDB
All DBs
Position
20:complement(33695395..33708166)
Genome browser
AA seq
807 aa
AA seq
DB search
MPTTENSTNETQNQASPANSGSGTANISDTIVQVGASVKAPIPSVSSPAIPATISKGTTK
DPEPGQTQPQNANNGSSATQLPVSVMHVAPTTSTVTVAPVQASAQPVTSSINSVVSNPAP
KVVMTTTGPRPISPVVAGPRVSSPTVTMSAQPPARMSSPLGPAVTRVATATQAPGKAAVI
AIPRPTTFQQPAASVRPPQTTSVQLPANFQIPPGMVLIRSDSGQLMLVSQQALAAAQGLA
ARTPGTGTSPSSRPPATQVSAATVVRKAENPGVIRVPPPPNPHVTTAQRTPLVKVVGAVL
TPPAGQSQTPRPMIRPVAPVTVTRSPGPGPLIIPTKPTNTPRATPPSITPEVLENVKKCK
NFLVTLIKLASSGTHSADMAKNVRELVKSLLDGRLEPEEFTDQLYRELKSSPQPYLVPFL
KKSLPAVRQLTPNPQLFIQEVDQPKPQAPAASKAPAPTPGRTPTLLSTNARPAHLSAASG
QPIKSTQLVIQQPRGVVYKPAVTTSAPAHTYLSVQNRSLAKPMVLQSGQHYNTGAIVRRT
PFLVPPPPAQRHPFKDSVGSFREEDDINDVASMAGVNVSEENARILATNSGLVGSVERSC
QDEPFLSPAPLLTHILHTGEKFGVSEVGSDVISLVSHATQERLRDLLEKVTVVAQHRKMA
LKEDYSHVQTSNVRSQLHFLEELERLEKQRRDDEERETLLRIARSRCNTEDPDQQLLKQR
AKELQQLEQAQLQHREANLTALAAIGPRRKRPLDSNGIQVGPGGIMSVLQRAGVQRVTGV
SLRDLLFCLEQDPPLRHSLTLYKGLLR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaccgaaaactccacaaatgaaactcaaaatcaggcatccccggcaaacagt
ggaagtggaaccgcgaatatctcggacacaattgtgcaggtgggggcgagtgtcaaagcc
ccgataccttctgtcagtagccctgcaatccccgccaccatttcgaaaggtacaacgaaa
gaccccgaacctggccaaacccagccacagaacgcaaataatggatccagtgccacccag
cttcccgtgtccgtgatgcatgttgcacctactacctccaccgtgacggtcgcacctgtc
caggcaagcgctcaaccagttacctcatccataaactcagtcgtgagcaacccggctcca
aaggtggtcatgacaaccacgggaccgagacccatttctccggtggtggcgggaccgaga
gtgagctctccaacggtgaccatgagcgcacaaccaccggcgcgcatgagctctcctttg
ggaccagccgtgactcgagttgccaccgcgacccaggcaccggggaaggctgcagtgata
gccataccaagaccaacaacttttcagcaaccagctgcatccgtcagacccccacagacc
acgtctgtccagcttccagccaactttcaaatcccgccaggcatggtgctcatccgtagt
gacagtggtcaactgatgctggtgtcccaacaagctttggccgcagcccagggcctcgca
gccagaactcctggcactgggacctctcctagctccaggccacccgccacgcaggtgtct
gcagcgactgtcgtgagaaaagctgagaatccaggggtgatcagagtgcctcctcctcct
aacccccatgtgaccacagcacagagaacccccttggttaaggtggtaggggctgttctg
acccctcctgcaggccagagccagacccccaggcctatgatccgcccagtggcccctgtc
acagtcacccgttctcctggccctggtcctctcatcatcccaaccaaacccaccaacacc
cccagggccacaccccccagcatcacacctgaggtcctggagaatgtgaagaagtgtaag
aacttcctggtgacgctgatcaagctggcctctagtgggacccactctgctgacatggcc
aagaacgtccgagagcttgtcaagagcctgctggatgggagacttgaacctgaggagttc
actgaccaactctaccgtgagctcaagtcttctccccagccctacctggtgccctttctc
aagaaaagtctcccagctgtgcggcagctcacccccaacccacagctcttcatccaggag
gttgaccaacccaagccacaggctccagccgcctccaaggccccggcccccactccaggc
cgcacccctaccctcctctccaccaacgcgaggcctgcccacctcagcgctgctagtggc
cagccaatcaaatccacccagctagtgatccagcagcctagaggtgtggtgtataagcct
gctgtgacaacctccgccccggcccatacatacctgtctgttcagaacaggagcctggcc
aaacccatggtcctacagtcaggacagcactacaacacaggagctattgtcaggcggact
cctttcctggtcccacctcctccagcccagagacatcccttcaaggacagtgttggttcc
ttcagggaggaggatgacatcaacgatgtggcctccatggctggggtcaacgtaagcgag
gagaatgcccgtatcctagcaaccaactctgggctggtgggctctgtggaacgatcctgt
caggacgaacccttcctgtccccagccccgctgctcacacacatcctccacactggtgag
aagtttggagtgtctgaggtggggtcagacgtgatcagtctggtgtctcacgccacacag
gagcgtctcagagacctgctggagaaagtcactgtggtggcacagcatcgcaagatggcc
ctcaaggaggactacagtcacgttcagaccagtaacgtgcgttcccagctccacttcctg
gaagagctggagcgtctggagaagcagaggagagacgatgaggagagggagacactgctc
cgcattgccaggagtcgctgtaacactgaggacccagaccagcaactactgaaacaacgg
gccaaagagctccagcagttggagcaggctcagctgcagcacagagaagccaacctcact
gccctggctgccatcggacctcgcaggaagagaccactggactccaatggaatccaggtg
gggccaggtggcattatgtcagtactacagagggctggggttcagagagtgactggggtc
tctctgagggacttgctgttctgtctagaacaggaccctcctctacgacactctctcact
ctctacaagggcctgctcagatag
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