Coregonus clupeaformis (lake whitefish): 121532887
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Entry
121532887 CDS
T08357
Symbol
ptger3
Name
(RefSeq) prostaglandin E2 receptor EP3 subtype
KO
K04260
prostaglandin E receptor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04020
Calcium signaling pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121532887 (ptger3)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121532887 (ptger3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121532887 (ptger3)
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Prostaglandin
121532887 (ptger3)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srbc
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
121532887
NCBI-ProteinID:
XP_041694618
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Position
20:11734090..11747764
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AA seq
385 aa
AA seq
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MTSDNCDSLDTWRNSSPGEMLESNKSLRESNVTKSGNCGSVSVVFPITMMVTGMVGNSLA
LMLVYSSYRKKENNRKKSFLLCIGSLALTDLFGQLLTSPIVISVYRADLKWDRIDSSGSL
CAFFGVCMTTFGLCSLFLASAMAIERALAITSPHWYSNHMKTSVTKQVLAVIWCLVLFFA
LLPIAGVGQYTLQWPGTWCFISTGDREVSGNMFFSITFAVLGIFSLLVTFSCNVVTIRGL
LIRCKTKSGTSHSSKQWERLTTETVIQLLGIMCVLLICWAPLLVLMLRMISTQTSSHHCK
PAEVSFTLSPSRDIQVDCNFFLTAIRLASLNQILDPWVYLLLREILLRKFCQVANAVSNC
SIDGQKETQTALDALNKQPADTNSL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgacaactgcgactctttggatacctggcgcaactcttctcctggagagatg
ttggaatccaacaagtccttgcgtgagagcaatgtcaccaaaagtggcaactgtggatcc
gtatcagttgttttccccattactatgatggtaacgggaatggtgggcaattctctcgct
cttatgctggtatatagctcgtacagaaaaaaagaaaataacaggaaaaagtctttccta
ctctgcatagggtcgctggcattgactgatctgtttggacagcttctcaccagcccgata
gttatatcggtttacagagccgatttgaaatgggaccgcatagactcatccgggagtctg
tgtgctttctttggagtgtgcatgacaacttttggcctgtgttctctattccttgccagc
gcaatggcaattgagagagcattggcgattacaagtcctcattggtactccaatcacatg
aaaacaagtgtgacaaagcaagtcctggcagttatatggtgtcttgttctgtttttcgcg
ctgttgccgatcgcaggagttgggcagtacacgctgcaatggccaggcacttggtgcttc
ataagcactggagacagagaggtctcgggcaacatgtttttctccatcactttcgctgtt
cttgggatattctcacttcttgtgactttctcctgcaacgtcgtcacaattcgtggatta
cttattcgttgcaaaacgaaatctggcacatctcactcatccaagcagtgggaacgatta
accacggagacagtcattcaactattgggaatcatgtgcgtgctgcttatatgctgggca
cctttactggtgctgatgttaagaatgatctcgacacagacgtcttcacatcactgcaaa
ccggcagaagtgtctttcactcttagtcctagtcgagacatccaggtggactgtaacttc
tttctcaccgccatccgcctggcctctctgaaccagatcctggacccttgggtttacctg
cttctaagggagattctactgcgcaagttctgccaggtggccaatgctgtgtccaactgc
tccatagatggacaaaaggagactcagacggccctggatgctctcaacaagcagcctgcc
gacactaacagtctgtag
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