Coregonus clupeaformis (lake whitefish): 121532896
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Entry
121532896 CDS
T08357
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03015
mRNA surveillance pathway
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04382
Cornified envelope formation
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121532896
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121532896
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121532896
09158 Development and regeneration
04382 Cornified envelope formation
121532896
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121532896
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121532896
03036 Chromosome and associated proteins [BR:
cclu03036
]
121532896
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121532896
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121532896
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121532896
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
SH3_14
Motif
Other DBs
NCBI-GeneID:
121532896
NCBI-ProteinID:
XP_041694629
LinkDB
All DBs
Position
21
Genome browser
AA seq
446 aa
AA seq
DB search
MKCFSRYLPYLFRPPTTILSSTCHTEADIISTVEFNPSGELLATGDKGGRVVVFQREQET
KSEPQRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKL
WKISERDRRPEGYNLKDEDGRIRDPSTITSLQVPVLQPTDLMVEATARRVFSNAHTYNIN
SISVNSDLQTYISTDDLRVNLWNLEITNQSFNIVDIKPGNMEDLTEVITAAEFHPQQCNT
LAYSSSRGSVRLCDTRKQALCDTHCKFFEEPEDPSTRSFFSEIISSISDIKFSHSGRFLM
TRDYLTVKVWDLNMETRPVQTYQVHDYLRGKLSSLYENDCIFDKFECVWNGSDSVIMTGS
YNNFFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILH
STWHPHENIIAVAASNNLYIFQDKVT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtttttcccgttatctcccgtacctcttccgccctcccaccaccatcctgtct
tccacatgccacaccgaagctgacatcatctccactgtggagtttaacccttcgggggag
ctgctggccacaggggacaaaggaggaagagtggtggtcttccagagagagcaggagact
aaaagtgagccccagaggcgaggggagtataatgtttacagtacgttccagagccatgag
ccagagtttgactacctgaagagtctggagatagaggagaagatcaacaagataagatgg
ctgccgcagcagaacgctgcttacttcctcctctccaccaatgataagacagtgaagctc
tggaagatcagtgagagagacagacgaccagagggatacaacctgaaggatgaagacgga
cgaatcagagacccatctacaatcacctcactacaggtgcctgtcctccagcccacagat
ctgatggtggaggcgacagcgcggcgtgttttcagtaatgcccacacctacaacatcaac
tccatctccgtgaactctgacctccagacctacatctccaccgatgacctcagggtcaac
ctgtggaacctggagatcaccaaccagagcttcaacattgtggacattaagccgggtaac
atggaggatctgacggaggtgattacagcagcagagttccatcctcaacagtgcaacacc
ttggcctacagcagcagtagagggtcagtacgactctgtgacacgaggaaacaggcgctc
tgcgacacacactgcaagttctttgaggagccagaggacccctccactcgttcatttttc
tcagagatcatctcttccatctcagacatcaagtttagtcacagcggtcgcttcctgatg
acacgggactacctgacagtcaaggtgtgggacctcaacatggagaccagaccggtccag
acataccaggtccatgactacctgagggggaagctgtcttctctgtacgagaacgactgc
atctttgacaagtttgagtgtgtctggaatgggtcagacagtgtcataatgacggggtcg
tataataatttcttccggatgtttgatcggaacaccaagaaagatgtgaccctggaggct
tccagagagaacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgttggaggg
aagcgtcgtaaagacgaggtgactgttgacagtctggacttcagtaagaaaatcctccac
tccacctggcacccacacgaaaacatcatcgccgtggcagccagtaacaacctctacatc
ttccaggacaaggtcacctag
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