Coregonus clupeaformis (lake whitefish): 121532919
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Entry
121532919 CDS
T08357
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121532919
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
121532919
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Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Det1
Motif
Other DBs
NCBI-GeneID:
121532919
NCBI-ProteinID:
XP_041694644
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Position
20:19276330..19289084
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AA seq
619 aa
AA seq
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MVYLAAVPMTVDSSPQVKNSFLSTSDKSSVHSSSSSHRWPENHQLEGEGRLQGEQPVHPH
TKKVGHVGSTPSLSKSSSLLLPDTVVTSAKYNGDVGRPLSSLGASPPNLSELDSARQEPL
QTLHRSVLEEVFSKGLSEDNSKANSEGGGDAPQKRTKDIGYRLGQRRALFGKRKQLSDYA
LIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLVSLSTAILLGLIVMYHAREIQLFMV
DNAADDWRIAMTYERIFLVVLELLVCAIHPIPGQYVFTWTARLAFTYTPSLTDADVDIVL
SIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFS
VSCWIIAAWTVRVCERYQDTQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLT
GIMGAGCTALVVAVVARKSELTRAEKHVHNFMMDTQLYKRVKNTAANVLRETWLIYKHTK
LVKKIDHARVRKHQRKFLQAIHQLRRVKLEQMKLTDQANTLVDLAKTQNMMYDLVSDLQL
RSEELDRRIGSLDDKLDSILVNLQALPSLLSQAVTQQHKDFLDGLAHRVRTVSSGSELHC
VPARCQRAPSTAPQTISYS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtttacctagctgctgtgccaatgactgtggacagcagcccacaagtaaagaattcg
ttcctgtctactagcgacaaaagcagtgttcactcctcttccagtagccatcggtggccg
gagaaccatcagctagagggagaaggacgactacaaggggagcaaccggtacatcctcat
accaaaaaggttggccatgttggttcaacgccttccctatccaagagcagtagccttctc
cttcccgacacagttgtgaccagcgctaaatacaatggggatgttgggagacccctgagc
agccttggagcttcgccacccaacctttcagagctggactcagcgagacaagagcccctc
cagactctccacaggtccgtcctggaggaggtgttctccaaaggcctcagtgaggacaat
agtaaggccaacagcgagggaggaggagacgcgccacagaagaggactaaggacattggc
tacagattgggccagcgtagggcgctatttggaaagcgcaaacagttgagcgactatgcc
ttgatctttgggatgtttgggattgttgtcatggtgacagagacggaactgtcctggggg
gtttacacaaaggaatcctcatactcatttgctctgaaatgccttgtcagcctttcaact
gctatattgctcggactcattgtgatgtaccatgcacgggaaatacagctcttcatggtg
gacaatgcagctgatgactggaggattgctatgacgtatgagcggatcttcctggttgtg
ctggagctgctggtctgtgccatccaccccatcccgggccagtacgtcttcacctggaca
gcccggctggcattcacctacacaccctcattgaccgatgccgacgtggacatcgtcctc
tccatccccatgttcctcaggctctacctaatcggtcgcgtcatgctgctgcacagcaag
ctcttcacggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaacaca
cgctttgtcatgaagaccctcatgaccatctgccccggcacagtgctgctggtcttcagc
gtctcttgttggatcatcgcggcgtggacggtgcgtgtctgtgagaggtatcaagacaca
caggaagtgaccagtaacttccttggggcaatgtggctgatctctatcacctttctctcc
attggttatggagacatggtccctcacacttactgtggaaagggtgtgtgtctgctgacc
ggaatcatgggggctggctgcactgccctggtggttgctgtagttgccaggaagtccgag
ttgaccagagctgagaagcatgttcacaactttatgatggacactcagctttataaacga
gtgaaaaacacagctgccaatgtactcagagagacatggcttatctacaaacacaccaag
ttagtcaagaagatcgatcacgccagggtacgcaaacatcagcggaaatttctgcaagcc
attcaccaactgcgcagagtcaaactggaacagatgaaactcaccgaccaggctaacaca
cttgtggatctagctaagactcaaaacatgatgtatgacctggtgtctgacctgcagctg
cgcagcgaggagctggataggaggatcggtagtttggacgacaaattggactccatccta
gtcaatttgcaggccctacccagccttctctcgcaggcggtcacacagcagcacaaggac
ttcctggatggcttggcccaccgcgtacggacagtctcgtcaggctccgagcttcactgc
gttcccgctaggtgccaacgggccccctccactgcaccacagaccatatcatacagctga
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