Coregonus clupeaformis (lake whitefish): 121532931 Help Entry 121532931         CDS       T08357                                  Name (RefSeq) roquin-1-like   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism cclu  Coregonus clupeaformis (lake whitefish) Brite KEGG Orthology (KO) [BR:cclu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cclu03000]     121532931    04121 Ubiquitin system [BR:cclu04121]     121532931 Transcription factors [BR:cclu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     121532931 Ubiquitin system [BR:cclu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     121532931 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-CCCH zf-C3HC4 zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 zf-RING_6 FYVE Motif Other DBs NCBI-GeneID:  121532931 NCBI-ProteinID:  XP_045061716 LinkDB All DBs Position 20:16458335..16481353 Genome browser AA seq 1076 aa AA seqDB search MPVQAPQWTEFLLCPICTQLFEESVRKPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IELLPLNTALLQLVGGQVPKRQPTTLLTGPEDIAHYEEASDCVEELALYLKPLSNSRGVG LSTSSAQSSLSRPMQRKLVTLVHCQLVEEEGRVRATRAARSLGERTVTELILQHQNPQQL SSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIA PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL LANIDPSPDSPPPTWELLDTGLVAVKTVVHGLVDFIQNHSKKGSDPQQPPQHSKYKTYMC RDMKQKGGCPRGASCTFAHSQDELEKYRKMNKRLAARRPLSLSLTQLNEVGLLPEEVGML EGLAHKGLTNGMVASVTGSAMPQLISRGADPSYEAIMRKPQSQGSHSAPGSPPDLLDPVP NRSMAHPRMAVDHLAMHKQVPRGPPMYPSQQGEHFCPPEPRAPPSALQYESSQYPPGNPP YPYQSSQYLPQPRYVPNLPPPNDPAMPTYPESSYPGTYPQERDCPPPPQPSGPHFSNANP HGYPPPPHYDGRRHPSYPPPQTYPHREEPSSMPADEASRERYPPEGYHPPGPHPGHMRPY ATREDYSRPQPTPTLDYLHRRRQEIMAQLEDRKQVTPPPFAPSPTLPHTYESNYTQEQQQ YMENSQTFAKYREPDYASQYSPWSCDTIGSYIGSKEGKSKDSMERMNAEGKGVEGQRRSA EARDDDPIIPFGSLPTVSRFGVISRTPKTGYQMAGPGQAMTPPQGTNRHKHTAATADYPY GNGAGWGGAPYTQPPQAHLSERPFQEREQLTMELQQVNQQINKQTAQAAQPSPGEWSSGS VSSQQLSLELHHVEREIGKRTRQIALENHVSHDGSGAYKLKPTENGQAENKMQREEHSLV LSEGCNGSSGVLLDGSAASSSLSCLTIKTSSLSLSADLPTTWGTDRQENSVVHPCS NT seq 3231 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagcgccgcaatggacggaattcctgctgtgtcccatctgcacccagttg tttgaggagagtgtccgcaagcccatcagcctgggctgtggacacaccgtctgcaaaatg tgcctgaacaagctgcaccgcaaggcctgcccctttgaccagacagccatcgccaccgac atcgagctgctgcctctcaacactgccctactgcagctggtgggaggacaggtgcccaaa cggcagcctaccaccttgctgacggggccagaggacatagcccactatgaggaagccagt gattgtgtggaggagctggctctgtacctgaaacccctgagcaacagcagaggtgtaggg ttgagcaccagcagtgcacaaagctctctgagtcggcccatgcagaggaagctggtgacc ctggtgcactgtcagctggtggaggaggagggccgggtcagggccacacgggcggccagg tccctgggagagcgcactgtcactgagctcattctgcagcaccagaacccccagcagctc tcctccaacctgtgggctgcagtcagggcaaggggctgccagtttctcggcccagcgatg caggaggaggctctgaagctagtgctgctggctctagaggatggctccgctctgtccagg aaggtcttggtgctgtttgtggttcaaaggttagagccacgcttcccccaggcctccaag accagcataggccacgtggtgcagctcctctacagggcctcctgctttaaggtgaccaag cgtgatgaggactcgtccctgatgcagctgaaggaggagttccggacatacgaggcgctg cggcgcgaacatgactcccagattgtccagatcgccatggagggtggcctccgcatcgcc cctgaccagtggtcctctctgctctatggggaccagtcgcacaagtcccacatgcagtcc atcatcgacaagttgcagacgccagcgtcgtttgctcagagcgttcaggagctgaccatt gccctgcagaggacaggcgacccggccaacctgaaccgtctgcgaccacacctggagctg cttgccaatatcgaccccagcccagactcccctccccccacgtgggagctgctggacacg ggcttggtggcggtgaaaacggtggtgcatggcctggtggacttcatccagaaccacagc aagaaggggagcgacccgcaacagcctccccagcacagtaaatacaagacgtacatgtgt cgggacatgaagcagaaggggggctgtcctcgaggagccagctgcaccttcgcccactct caggacgagctagagaagtatcgtaagatgaacaagcgtctggctgcccgccggcccctc agcctatccctgacgcagctcaacgaggtgggcctattgcccgaggaggtggggatgctg gaggggctggcccacaagggcctgaccaatggcatggtggcgtcagtcacaggctccgcc atgccccagctcatctcccgcggtgccgacccctcctacgaggccattatgcggaagccc cagtcccagggaagccacagtgcacccggctcgccccctgacttactggaccctgtgccc aatcggtccatggcccaccccaggatggcagtggaccacctggccatgcacaagcaggtg cccagggggccccccatgtacccctcacagcagggtgaacatttctgcccccccgagccc agggcaccgccatcagccctgcagtacgagtcctcccagtaccccccaggtaaccccccc tacccttaccagtcctcccagtaccttccccagccccgctacgtcccaaacctccctccc cctaacgacccggccatgcccacctacccggagtcctcctaccccggtacctacccacag gagcgtgactgtccccctcccccccagccctcgggtccccacttctccaacgccaacccc catgggtacccacctccccctcattacgacggccgtcgacacccctcctaccccccgcca caaacctatccccaccgcgaggaaccctcctctatgcctgcggacgaggcctccagagaa agataccctcccgagggttaccacccccctggcccccaccccggccacatgaggccctac gccacaagggaggattacagtcggccccagcccactcccactttggactacctgcaccgc cgacgccaggagatcatggcccagttggaggacaggaagcaggtcactcccccacccttc gccccctcgcccacgctgccacacacctacgagtccaactacacacaggagcaacagcag tacatggagaactcccaaacgtttgcaaagtatcgtgagccagactacgctagccagtac tctccttggtcatgtgacaccattggctcctacattggcagcaaggaggggaagtctaaa gacagcatggagaggatgaatgctgaggggaaaggtgtggagggccagcgcaggtcggcc gaggccagagacgacgaccctatcatacctttcggctccctgcccactgtttcgcgattc ggggtgatctcccgcacccccaagacgggctaccagatggccgggccagggcaggccatg acccccccacaggggaccaacagacacaaacacaccgctgcaacagcggactacccctat gggaacggtgcaggatggggtggtgccccgtacacccagccccctcaggcccacctcagt gaaaggccattccaggagagggagcagctgacgatggagctccagcaggtcaatcagcag atcaacaagcagactgcccaggcagcccagcccagcccgggggagtggtcgtcggggagc gtctccagccaacagctgagcctggagctccaccatgtggagagggagatcggcaagagg acccgccagatagccctggagaaccatgtatctcatgatgggagcggggcgtacaagctg aagcccactgagaatgggcaggctgagaacaaaatgcagagagaggagcactcgttggtt ctcagtgagggctgtaacggttccagtggtgtcctgctggacggcagtgcggccagcagc agtttgtcctgcctgaccatcaagacctcatccctcagcctgtccgcagacctccccacc acctggggaaccgaccgacaggagaacagcgtggtccacccgtgctcctag

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