Coregonus clupeaformis (lake whitefish): 121532953
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Entry
121532953 CDS
T08357
Name
(RefSeq) calcium-activated chloride channel regulator 1
KO
K05030
calcium-activated chloride channel regulator 3/4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121532953
Ion channels [BR:
cclu04040
]
Chloride channels
Chloride channel, calcium-activated (CaCC)
121532953
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GFIT
Motif
Pfam:
CLCA
VWA
VWA_2
MG2
Y_Y_Y
VWA_CoxE
fn3
CobT_C
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
121532953
NCBI-ProteinID:
XP_041694665
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Position
20:complement(28738575..28751983)
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AA seq
909 aa
AA seq
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MASKAVAVLLLVYLSGFTFGIKLEGNGYTDILVAINPEVPEDPVLITQIEEMIKEASRHL
LSATEKNFYFKEVTILVPPNWNKRNYSRAKTEVYDKANIIIDEPNKSHGDQPYTLQYGEC
GSEGRYIHLTPDFMLDDDVAKNYGPRGKVFVHEWAHLRWGVFDEYNEEKPFYTSGSSIEA
TRCTINITGKSINKNDQNSCTTDPVTGLYTKDCVFYPDMHQTTSASIMYNQGLDAVKEFC
TKKTHNTEAPNMQNRLCGNRGVEEVITSLSVDAGVAVVPTPPSILPTFTVVQRRQRVVCL
VLDVSGSMTGQRIQTLRQAASLFLRQIIEDQSLVGIAIFDSTGRPLKSLTLINSNSKREE
LVDSLPKDSGGGTQICEGLKEGLKVLQEDDGNATGDEIVFLTDGESNTPMDCLPLVKKSS
AIIHTISLGPNGDKLLPEMSNVSGGKFFRAEDGLNSNELVDVFASLTTSDGNLTQQTIQL
ESSGLTTSDWFNGSVSIDRTVGNNTSVLVLYEKTQPAILLTSPSGQIYDESKFKADPSAK
SCTMDIPGTAETGKWTYSLRNKQPTPQAMSMTVTSRAVSKDILPVTAKAHMSQLSSDGSK
PMVVYAEVSQDKVPVILADVIATITPDSGVPYELKLQDNGAGADAFRHDGIYSSYFTNLA
TGKYSLKVKVQNDDGTARFSLRRHSGALYIPGYVVDGQVVMNPPKPPVSEDDLQADVGSF
TRTAIGESFSVSLPPGVPPPNFPPNKITDLNAEIEEDKVVLIWTAPGEDMDQGTATAYEI
RFSEDSDLLRSNFSTAHLVTYNLPPKKAGSIEKLSFTLFSIIKNATTLFFAAKAEDKAFL
KSETSNIIQVTKIVPKAPVPTDAPGGPGTSGGGVNITAIVISVTTVTMVACLIASVTMCS
MKSRRVSHA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagcagtggctgtgttgctgctggtttacctgtcaggatttacttttggg
atcaagctggaaggaaatggatacactgacattctggttgcaattaaccctgaggtgcct
gaggacccagtgctcatcacacaaatcgaggaaatgattaaagaagcctccagacatcta
cttagcgcaacagagaaaaatttctatttcaaggaagtcacaatattagtgccaccaaat
tggaacaaaagaaattactccagagcaaagacggaggtctacgataaggccaatataata
attgatgagccaaataaatcacatggcgatcagccttacactctgcagtatggtgaatgt
ggatctgagggccggtacattcatttgactcctgacttcatgctagatgatgatgtcgct
aaaaactatggacccagaggtaaggtttttgtccatgaatgggcacatctaagatgggga
gtttttgatgaatataatgaagaaaaaccattctacacgtcaggttcttcaatcgaggca
acaagatgtaccataaacattacaggaaagtccatcaacaaaaatgaccaaaacagctgc
accactgatcctgtgactgggttatacaccaaagactgtgtattctatcctgacatgcac
cagacaacctctgcatctatcatgtataatcaaggccttgatgctgtaaaagagttctgt
acaaaaaaaactcacaacactgaggctccaaacatgcagaacagactgtgtggtaacaga
ggtgtagaggaagttatcacctcactgtctgtagatgccggtgtggcagtcgtgccaaca
ccaccaagtatactacccacattcactgtggttcagcgacggcaaagagttgtctgtctt
gtccttgatgtttcaggaagcatgacgggtcagagaatccagacactacggcaggcagcc
tcattgttcttgaggcagatcattgaagaccaatctttagttgggattgcaatatttgac
agcactggcagacccctaaaatctttgactctgattaacagtaacagcaagagggaagag
ctggttgattctttgccaaaagatagtggtggaggcactcaaatttgtgaaggccttaaa
gaaggtttaaaggttcttcaagaagatgatggaaacgctacaggagatgaaatagttttc
ttgactgatggggaatcaaatacaccaatggattgtttgccgttagtcaaaaaaagcagt
gcaattatacatacaatttctttgggaccaaatggagacaaactattgccagaaatgtca
aatgtatcaggtggtaaatttttcagagctgaggatggtttgaattccaatgaacttgtg
gatgtcttcgcttcactcacaacatctgatggaaatctgactcagcaaacaattcagctt
gaaagctctggattgacaactagtgattggtttaatgggtctgtgtctattgacagaaca
gttggaaacaacacaagtgttttagtcctttatgaaaaaactcaacctgccatcctttta
acaagcccctctggacaaatatatgatgaatcaaaattcaaagctgacccttcagcaaag
agttgcacaatggatattccaggaactgcagaaactggaaagtggacatacagccttaga
aataaacaaccaacaccccaggctatgtcaatgactgtgacaagtcgtgctgtcagtaaa
gatatattaccagtcactgccaaagcccacatgagccaactgtccagtgatggcagcaaa
cccatggtggtgtatgcagaggtcagccaggataaagttccagtgattctggcagatgtg
attgccacaataacgcctgacagtggagtcccatatgagctgaaactgcaagataatgga
gcaggtgctgatgctttcagacatgacggcatctattccagttacttcactaatctagca
acaggaaaatacagcttgaaagtgaaagtacagaacgatgacggcacagccagattctcc
ctcaggagacacagtggagcactttacatacctggatatgtggttgatggacaagtagtg
atgaatcccccaaagcccccagtcagtgaggacgacctgcaggctgatgtgggcagcttc
accaggacagctataggagagagcttctcagtcagtctcccacctggtgtcccccctcca
aattttccccctaacaaaatcacagacctgaatgcagagatagaggaggacaaagtagta
ctcatctggactgcacctggggaagacatggatcaaggcacagcaacggcctatgagatc
cgttttagtgaagattcggacctactcagatccaacttcagtaccgcacatcttgtcaca
tacaacctcccaccaaagaaggcaggctccatagaaaagctctctttcactctcttctca
atcataaaaaacgccaccactctgttctttgcagcaaaagcagaagacaaagctttcctg
aaatctgaaacatccaacattattcaagtgaccaagattgttcccaaagctcctgttcca
actgatgctcctggtgggccaggtacatcaggcggtggtgtgaacattactgctatagtc
atatcagtcaccacagtaactatggtggcttgtctgattgctagtgtgacaatgtgttca
atgaaatcaaggagagttagtcatgcttaa
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