Coregonus clupeaformis (lake whitefish): 121532970
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Entry
121532970 CDS
T08357
Name
(RefSeq) AP2-interacting clathrin-endocytosis protein-like
KO
K10480
BTB/POZ domain-containing protein 8
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121532970
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121532970
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BTBD8_C
Motif
Other DBs
NCBI-GeneID:
121532970
NCBI-ProteinID:
XP_041694682
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All DBs
Position
20:complement(35377819..35399592)
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AA seq
1273 aa
AA seq
DB search
MVDDDSSAGFVMCDDWEPALLKKLCSAIGDGVMGVNYCDLFTAVDHLAGEKDMEGETPLE
EEVQREEEIGALHARLWTFLLQSFYSVRHTRGWETLPSKHRERILAAALDKGGSRRLGEK
PVFTSSQQPRVVRCPSGPAAACESPPVHRTIWVIRNTGTGSCTVAASSATMKSDGLGTPG
LTSTAGTGTNATKPGDTDPLRAKNVKTKQPGDHRSTTAKAKTTTSASAKPVLNGTAGPGR
ARREVTTANGPRGSPTGGKGSKDQDRKANPNPGARPKTSPPGTTSTAQARPGKLQKSTAG
KGDSLQGADSSMAHPATTTPSTSGSASPDNSSGSPRNCPTMPDVKTKTQAKVLTKSPLTK
PPQKIDTAKTNSPTNKPSTREANKAKLPATGRTTTVGTGARADTKGMSPPTGSAENHVSR
SGSSLSARKPASPRKQEDKDSSTVSADKTARKTTKNTPATPATAKYTSKPAKAISSSSPS
KQPPLATAKPGPKQKGTSESPTEKASPKSVGPVKNSSTSVVSSKKPAAKEKEGSNGKTSA
DTQQANDTGAGAERVPSHSDPREKASEPAATSTEQSPAHNSPLPPGPKGHSGGEDSLSLP
LNASPTQSPQKSAKQPGKPNCTGGVRALSSQPPATNHISQGNDLVNREPAKHTEGTYTGK
HTPGSATDLPLDTPTPGSPLEDSWSSLHHQVSPESESGSATTSSDDIKPRSEDYDAGGSQ
DDVDDCCSNDRGESKGGGTMRCHDFLGRSSSDTSTPEELKMLDGGLRVEVRLKGREGETT
SEEEGVRRRPRSWLSRDRDEVPVEEEVEANITVKQVPDSQLFSSEESEESEEEEEEDERS
EVEVIPVHQAPPPPADPSSQFQGIVNLAFEDGADPDQDNEQQQQMDYQSASNFRRSVLIS
VDECEELGSEECAVQTPPQQQPDDPLTPCDVFGSDRPPAPQSAPNSISHSGGHLASDLPK
STPQQQQEQGNKHESNNNKPNKPIVFLTEIQDPLVDDHNPTKVEGVEPSPGCPPLDHDPT
DLPPQERERPCHLDLRPAEQYSNGGSPRKNPSTKPSQASIPVPVDSKRSDLHTDLNYPQQ
KGGSPAHAAIPQSPAGDIEGQCHRLDQTTTPTCTHDRRSSKALSPIYGLNVRQAFEYPSS
SDNRSRRSTVGREEEEENDEDYNEESSTFAERDWSMLKQLLSDQESSLGIINPVPEDLNL
AQYLIKQTLSLSRDCLDTQQTFLPHEKETFKRWAELISPLEDSTTSITVTSFSPEDAASP
QGEWTIVELETYH
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgatgacagcagtgccggctttgtcatgtgtgatgattgggagccggccctg
ttgaagaagctgtgttcagccataggagacggggtcatgggggtcaactattgtgaccta
ttcaccgctgtggatcacctggctggagagaaggacatggaaggagagacacccctggag
gaggaggttcagagggaagaggagattggtgctctgcacgctaggctgtggaccttcctg
ctccagtcattctactccgtccgccatacgcggggatgggagaccctgccctccaagcac
agagagaggatactggcagctgctcttgataaaggaggcagtagaagacttggggaaaag
cctgtattcaccagctcacagcagccgagggttgtaagatgcccctcaggtcctgcagct
gcttgtgagagccctcctgtccacaggaccatttgggtaatcaggaacacaggaacagga
agttgcactgtggctgcatcatcagccaccatgaagtcagatgggctggggacgccaggc
ctcacatccaccgcagggacagggactaatgctaccaagcctggagacactgacccatta
agggcaaagaacgtcaagaccaagcagccaggtgaccaccggagcaccacggctaaagcc
aagactacaacttctgcatcagccaaaccagtgctcaacggtacggctggcccagggagg
gctaggagggaggtaaccaccgctaacggacccagggggtccccaacaggggggaagggg
tctaaggaccaggacaggaaggctaaccctaaccctggagccaggcccaagacctctccc
ccaggcaccacctccacagctcaggccaggccagggaagctgcagaagagtacagcaggg
aagggtgactctcttcagggggcagacagcagcatggcccaccccgccactaccaccccc
tccacatcaggcagtgcctcccctgacaacagttccggaagcccacgcaactgccccacc
atgccagatgttaagacaaaaacccaggctaaagttctgaccaaatctccactgaccaaa
cccccccagaaaatagacacagcaaagaccaacagccctaccaataagcccagcaccaga
gaggccaataaagccaagctccccgctacaggaagaacaacaactgtaggaacaggagcc
agagcagacacgaaggggatgagcccaccaacaggctcagctgagaaccatgtctctaga
tctgggtcctccctgagtgccagaaagcctgcgtctcccaggaaacaggaggataaggat
agctccacagtctcagcagacaaaacagccaggaagaccacaaaaaacaccccagctacc
ccagccacagccaaatatacttctaaaccagcaaaggccatctccagctcctctccttcc
aaacagcctccactagcaacggccaaacctggaccaaagcagaagggtacctctgaatct
cctacagagaaagcctcacccaagtcagttgggccagttaaaaactcttccacctctgtc
gtttcatccaaaaagcctgcagctaaagagaaagagggatctaatggtaaaacctctgca
gacacccagcaggctaatgacactggtgctggagcagagagggtcccctcccattcagat
cccagagagaaggcctcagagccagcagcaacatccacagagcagagtccagctcataac
agcccactaccaccaggccccaagggccacagtggaggagaggactccctctccttaccc
ctgaacgccagccctacgcaaagtcctcagaagtctgccaaacaaccaggtaaacctaac
tgcacaggaggagtcagggctctgtccagtcagccaccagcaaccaaccacatctctcaa
gggaatgacctcgtaaacagagagcctgctaagcacacagaggggacatacacaggtaaa
cacactcctggctcagccacagaccttccgctggacaccccaaccccaggcagccctctg
gaggactcgtggagcagcctgcaccaccaggtcagccccgagtcagaatccggtagcgcc
accacctcatcagacgacatcaagcctcgctctgaggactacgatgccgggggctcccag
gatgatgtggacgactgctgctccaatgatcgcggcgaatccaaggggggcggcaccatg
cgttgccatgacttcctgggccgcagtagtagtgacacaagtacgcctgaggagctgaag
atgctggatggcgggctgcgggtcgaggtgaggctgaaggggcgcgagggagagaccacc
agcgaggaggaaggggtgaggcgacggccgcgctcctggctgagcagggacagagacgag
gtccctgttgaggaggaggtggaggccaatattacggtgaagcaggtccccgatagccag
ctcttctcctctgaggagtccgaggagtctgaagaggaggaggaagaggatgagaggtca
gaggtggaggttattcctgttcaccaggcccctccgcctcctgctgacccctcctctcag
ttccagggcattgtgaacctggccttcgaggacggagctgaccctgaccaagacaacgaa
caacagcagcaaatggactaccaatcagcctctaacttccgccgatctgttctgatctct
gttgacgagtgtgaggagctgggatcagaggagtgcgcggtgcagactccgccccagcaa
cagcctgatgacccactcacgccctgcgacgtcttcgggagcgaccgtcctccggcccct
cagtcagccccaaactccatctctcactctgggggtcacctggcatcggaccttcccaaa
agcacacctcagcagcagcaggaacaaggcaacaagcacgagtccaacaacaacaaaccc
aacaaacccatcgttttcctcactgagatccaggatcctcttgtagatgaccataacccc
accaaggtggagggagtagagccctcccctggttgccctcctctggaccatgaccccact
gacctgcctccccaggagcgggagagaccctgccacctagacctccggcctgctgaacag
tacagcaatggaggatcaccacgcaagaacccctcaaccaagcctagccaagcatctata
cctgtgcctgtagacagcaagagatcagacttacatacagacttaaattaccctcagcag
aaagggggctctcctgcacatgcagctatcccacaatccccagcaggggacattgaggga
caatgtcacagattggatcaaacaacaaccccaacctgtacacatgaccgacgctcctcc
aaagccctctctcccatctacggactgaacgtgagacaagcctttgagtaccccagctcc
tctgacaacaggagcaggaggagcacagtggggcgggaggaggaggaggagaacgatgaa
gattacaatgaagagagcagtacgtttgcggagcgtgactggagcatgctgaagcaactc
ctctcggaccaggagtccagtctgggcatcataaacccagtccctgaggacctaaaccta
gcccagtatctcatcaagcagaccctgtccctctcccgggactgcctggacacacagcag
accttcctgccccacgagaaggagacatttaaacgctgggcagagctcatatcacccctg
gaggactccacaaccagcatcactgtgaccagcttctcgcctgaggatgctgcctctccg
cagggggagtggaccatcgtggagctagaaacgtatcactga
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