Coregonus clupeaformis (lake whitefish): 121533057
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Entry
121533057 CDS
T08357
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cclu02000
]
121533057
03037 Cilium and associated proteins [BR:
cclu03037
]
121533057
Transporters [BR:
cclu02000
]
Other transporters
Pores ion channels [TC:
1
]
121533057
Cilium and associated proteins [BR:
cclu03037
]
Other cilia and associated proteins
Stereociliary proteins
121533057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121533057
NCBI-ProteinID:
XP_045075591
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MPSRTIGRSRGAIISQYCNKTMKLRRRRQSRPSIKDFSRSARPSIRGYGVETGGVETEGV
EGEGRKRDHLVNNLQNLSLSDRVRMLRAMPLSVAEKSELRRLADRKGLRSKHSQIPCCSQ
LKYNIINVSHTDKHSQIPCCSQLKYNIINVSHTDKHSQIPCCSQLKYNIINVSHTDKHSQ
IPCCSQLKYNIINVSHTDKHSQIPCCSQLKYNIINVSHTDKHSQIPCCSQLKYNIINVSH
TDKHSQIPCCSQLKYNIINVSHTDKHSQIPCCSQLKYNIINVSHTDKHSQIPCCSQLKYN
IINVSHTDKHSQIPCCSQLKYNIINVSHTDKHSQIPCCSQLKYNIINVSHTDKHSQIPCC
SQLKYNIINVSHTDKHSQIPCCSQLKYNIINALRHSWYSCLSFLHSLQLWQVALKRVSGR
FGTGVLSYFLFVKTLLFFNIFLFLVTVLFLALPQAVHPPRLTQGHVAFSGLELLTGGGYF
SDSVMYYGYYSNSTLYKNCSISSSGMDQQPSHSPSKRTMETDCGVKLSYNMPLAYFFTIG
GAFFITCIILVYSMSKSFGQSFRIDKSHGILAMKVFTSWDFKVIKKTSVKLRSENICTQL
KELLEETNRKHVQKTVCQRIGRVTVHGLAWFICIGSTVACVLALYYFSEYMHKDLQYRSR
IPTKDPLLKEASLLALPVVVSLINLLLPGLFNATAWMEEYDSPSVHTYVSISRNLMLKVS
VLVVLCFHWLGRIASDPNSIGLQCWESFVGQELYRFLLMDFIFTILDTFFGEFLWRLFSQ
RVLKRKRKPVFDIARNVLELIYGQTLAWLGV
NT seq
2435 nt
NT seq
+upstream
nt +downstream
nt
atgcccagccgcaccatcggtcgcagtcgaggtgctatcatctctcagtactgtaacaag
accatgaagttgaggagacgcagacagagcagaccttccataaaagacttttcccgctcc
gcacgacccagtatccgtggttacggcgtggagacgggaggcgtggagaccgaaggcgtg
gaaggggaggggcgtaagcgtgaccacctggtcaacaaccttcagaacctctctctgagt
gaccgggtcaggatgctgcgagccatgcctctgtctgtggctgagaagagtgaactaagg
aggttggctgataggaagggtctacgctccaaacacagtcagatcccctgctgtagccag
ctgaagtataacatcatcaacgtaagtcacacagacaaacacagtcagatcccctgctgt
agccagctgaagtataacatcatcaacgtaagtcacacagacaaacacagtcagatcccc
tgctgtagccagctgaagtataacatcatcaacgtaagtcacacagacaaacacagtcag
atcccctgctgtagccagctgaagtataacatcatcaacgtaagtcacacagacaaacac
agtcagatcccctgctgtagccagctgaagtataacatcatcaacgtaagtcacacagac
aaacacagtcagatcccctgctgtagccagctgaagtataacatcatcaacgtaagtcac
acagacaaacacagtcagatcccctgctgtagccagctgaagtataacatcatcaacgta
agtcacacagacaaacacagtcagatcccctgctgtagccagctgaagtataacatcatc
aacgtaagtcacacagacaaacacagtcagatcccctgctgtagccagctgaagtataac
atcatcaacgtaagtcacacagacaaacacagtcagatcccctgctgtagccagctgaag
tataacatcatcaacgtaagtcacacagacaaacacagtcagatcccctgctgtagccag
ctgaagtataacatcatcaacgtaagtcacacagacaaacacagtcagatcccctgctgt
agccagctgaagtataacatcatcaacgtaagtcacacagacaaacacagtcagatcccc
tgctgtagccagctgaagtataacatcatcaacgctctgagacatagctggtacagctgt
ctgtccttcctccactccctacaactgtggcaggtggcgctgaagagggtgagcggtcgt
ttcggcaccggcgtcctctcctacttcctgttcgtcaagaccctcctcttcttcaacatc
ttcctgttcctggtcacggttttgttcctggccctgccccaggcagtacacccccccagg
ttaacccagggacacgtagccttctctgggctggagctgctcactggagggggttatttc
tcagactcagtgatgtactatggttactatagtaactctaccctgtataagaactgtagt
atcagtagtagcggtatggaccagcagcccagtcactctccatctaaaaggacaatggaa
acagactgtggagtgaagctgtcctacaacatgcccctggcgtacttcttcaccatagga
ggggctttcttcatcacctgcatcatcctcgtctacagcatgtccaagtcgtttggtcag
agtttccgtatagacaagtctcatggtatcctggcgatgaaggtgttcacttcctgggac
tttaaagtcatcaagaagacctccgtcaaactccgctctgaaaacatctgcactcaactc
aaggagttgttggaggagactaatcggaagcatgtccagaagacagtgtgtcagagaata
ggacgtgtgacagtacatggtctggcatggttcatctgtataggcagtactgtggcctgt
gttctagctctgtactacttctctgagtacatgcacaaggacctccagtacagatctcgt
attcccactaaggaccctctcctgaaggaagccagtctgttagccctgccagtcgtagtg
tctctcatcaacctcctgctccctggcctcttcaacgctactgcctggatggaggagtac
gactcgcccagcgtacacacatacgtctccatcagcaggaacctgatgttgaaagtgagc
gtgctcgtagtgctgtgcttccattggctgggccggatcgcttctgaccccaacagcatc
ggcctgcagtgctgggagagttttgtaggacaggagctgtaccgcttcctcctcatggat
ttcatctttaccatactggacaccttctttggagagttcctctggaggttgttttctcag
agggtgttgaagaggaaaaggaagcctgtgtttgacatcgccaggaacgtgttggaactc
atctacggacagacactggcctggttgggggtgtt
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