Coregonus clupeaformis (lake whitefish): 121533084
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Entry
121533084 CDS
T08357
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121533084
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Others
Others
121533084
Endosome - Lysosome transport
121533084
Endosome - Golgi transport
121533084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
121533084
NCBI-ProteinID:
XP_041694780
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MDTWLGFSPGLHLTLCTWLLISAHTQLNAKAEISCSSCQSPVQLHLDELQLDTGMHAATG
RRQAAKALERVRLEYQLVGVTDQHTGVPSETQQAGVPVDEPRFTDDGVTAKVALEDSTRF
SENEETYGGEYIIGVNDLGKVKDGAGDVALRRVKRSGPDRPEFRESLRTGGPGLEGETSD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGTSRGEDPKLSSTTFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASLDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCRALTCSEPNRNYPFPGY
IDISSLVVQDDYMFIQVTTAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANRRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSELSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTV
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDHAKVLSAESCICR
AHDFECDYGYERRREGNCLPSFWFNPAVVSRNCSQGQNYLNSTGYRKVVSNNCIKGVKDM
YTPRKQMCPNRAPKGLSLSTREGKLTADLGTNVTFLVHLDEGDSMRTNIQLDFGDGTAVS
YSNLSWIEEGIRHVYKTAGIFRVSALAENSLGFDTTTLYLHVTCPVEHVQLLAPFVAIKN
KEVNLTAVVWPIHSRTLTYFWWLGNSTEPVISLDGSISYTFTSEGMNTVTVQVSSANAIL
QDTKTIAVQEFFKSLLLSFSPNLDEFNPDVPEWRQDVGRVIKKALLQVSDFPEDQLLVAV
FPGVPTAAELLLLPHKNQSEGRKNKEEELEQISEILASALNQNLVEFELKPGARVIVYIT
QLTLGKERTPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKE
QEMIGSVSQSDSTPKITLSEFSTPTEVMEKEMDARVKRRIGNACESTREIPNCTSV
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttcagcccaggcttgcacttaactctgtgtacctggcttctg
atctccgctcatacccagctaaatgcaaaggcggagatatcttgctcctcgtgccagtcg
ccggtccagctacacctggatgaattacagctggataccggtatgcacgcggctactggt
aggaggcaggcggccaaagcactggaacgggtccggctggagtaccagctagtcggagtt
actgaccaacatactggagtaccaagcgaaacccaacaggcaggtgttcccgtggatgag
ccgagattcactgatgatggagttaccgcaaaagtcgctctggaagattcaacccggttt
agtgaaaacgaagaaacgtatggtggtgaatatattattggggtgaatgatttaggtaaa
gtcaaggatggtgctggggatgttgcgttacggagagtgaagcgaagcggtcccgatcgc
cccgagtttagggagagccttaggacaggtggacccggtttggaaggagagacctcggat
gagagaaggagtcctggtccgttactggacggacacagactgggccgatctgaattcaag
tggaacagggacgagggtcgagggacttccagaggagaagatcccaaactaagcagcact
actttcgccttgaccggggactccgcgcataaccacgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactctacgactttcacctggggagtgttaca
gagagcaccctgtggagatcaacagactatggatccacctatgagaggatgaatgacaaa
gtgggatctaagacggtgctgagttacctgtatgtctgtccatccaacaagagaaagata
atggtgctgacagaccctgagtttgagagtagtgtgctcatcagctcggatgaaggagcg
agctatcagaaataccgcctcagcttctacatcctaagcctcctgttccacccaacacag
gaggattgggccctagcctacagccacgaccagaagttgtatgcctccctggactttggg
cgaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggttcacatggaggcacacacccctaacggacgtatacagtat
gtaacatgccgggctctaacgtgctcagagcccaacagaaactaccccttccctggatac
attgacatcagctcactggtggtccaagatgactatatgtttattcaggttactacagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgccg
aaatattctctgcctaaggacctccacatcgtcagcacagacgagcaccaggtctttgcg
gcggtgcaggagtggaaccagaacgacacctacaacctgtacctctccgacacccggggc
atcctcttcaccctggccatggagaacgttaagactacccgtggcctggggggcaaccag
atgctggacctgtacgaggtagcaggtatcaaaggcatgctgatcgctaacaggagactg
gacaaccaggtgaagacctacatcacctacaacaagggccgtgattggaggttactgcag
gccccggcgaccgacctggctggcaacgatatccactgtatattgcccttctgttcactc
catctccaactgcagacatctgaaaacccctacctgtcaggcagcatatcaaccaaggcc
tcagcaccgggaatcatagtggccacagggaatattgggtctgagctgtcgtacaataac
gttggaatgttcatctcatctgatgctggtaacaactggagacagatattcgaggaggaa
cacaacgtctggtttctggataaaggaggggccctagtcgctgtgaaacaaccaaccgtc
cccaccagacatttacagatcagttttgatgaggggaggcagtggaccagacatagcttc
tccttggtgcctctgttcgtggacgggatgctggtggaggccgggacagagaaccagatc
atgacgttttttggacacttcagccataggtcagagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aagggagagccgtgtgtgatgggacagaaacagatctatatgaaacgcagaccaggaaac
tattgcatgctgggaaaagaccatgccaaagtcctctctgctgagtcgtgtatctgtcgg
gcccatgactttgaatgtgattatggctatgaacggcgtagagaagggaactgtctacca
tcgttctggttcaacccagcagttgtatcaaggaactgcagccaaggacagaactacctc
aacagcacagggtaccgaaaagtggtgtccaacaactgcatcaagggagtcaaggacatg
tacacacccaggaagcagatgtgtcccaacagggctccaaaaggcctttctctctccacc
agagagggcaagcttaccgccgacctgggcaccaacgtcacattcctggtgcatctggat
gagggtgactcaatgagaaccaacatccaactggatttcggagatgggacggcagtctcc
tactccaacctgagctggatcgaagaggggatcagacacgtttacaagacggctgggata
ttccgtgtctcagccttggcagagaacagcctgggatttgataccacaaccttgtacctc
catgttacatgtcctgtggaacatgtccagctgttagctccgtttgtggccatcaagaac
aaggaagtaaacctaacagcagtggtctggccaatccactccaggaccctcacctacttc
tggtggcttgggaacagcactgagccggtaatcagcttagacgggagcatctcgtacacc
ttcaccagcgagggaatgaacactgttacggtccaagtgtcttcagcaaacgccatactg
caagacaccaagacaatagcagtccaagagttcttcaaatctctgcttttatctttctcc
cctaatctggacgagttcaaccctgacgtccccgagtggagacaggatgtggggagagtc
attaagaaggctctgctccaagtgtcagactttccagaggatcagctattggttgcagtg
tttccaggtgtgccaacggccgctgagctcctcctgttaccacacaagaaccaatcagag
ggccgtaaaaataaagaggaggagctagagcagatctctgagatacttgccagcgctctc
aaccagaatctggtggagttcgagctaaagccaggagcaagagtaatcgtttacatcaca
cagctaactttgggtaaggaaagaacacccttggtggattccagcccgagacacagcagt
tcagccatgctgatgctcctatcagtagtattcctgggtttagcagtgtttctcatctac
aaattcaagagaaaaatcccctggattaacatatatgcagaggtgaaccaggagaaagag
caggagatgatcggttcggtcagccagagcgacagcacgcctaagatcaccctcagtgag
ttctccacgcccacagaagtcatggagaaggagatggacgcccgggttaaacggcgaatt
ggaaatgcctgcgagagcacaagggagattcctaactgtactagcgtgtaa
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integrated database retrieval system
